Analysis of interatomic Contacts of Structural Units in PDB entry:
5X2H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5X2H entry

There are 4 chains in PDB entry 5X2H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 984
B
 G 1 C 93
C
 C -7 C 20
D
 A 1 G 8
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 5X2H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 77Right-handed alpha
Helix 2
AA2
A
79 84Right-handed 310
Helix 3
AA3
A
91 95Right-handed 310
Helix 4
AA4
A
100 108Right-handed alpha
Helix 5
AA5
A
114 128Right-handed alpha
Helix 6
AA6
A
143 157Right-handed alpha
Helix 7
AA7
A
161 170Right-handed alpha
Helix 8
AA8
A
196 214Right-handed alpha
Helix 9
AA9
A
219 231Right-handed alpha
Helix 10
AB1
A
239 243Right-handed 310
Helix 11
AB2
A
259 283Right-handed alpha
Helix 12
AB3
A
287 302Right-handed alpha
Helix 13
AB4
A
306 313Right-handed alpha
Helix 14
AB5
A
329 339Right-handed alpha
Helix 15
AB6
A
349 362Right-handed alpha
Helix 16
AB7
A
364 374Right-handed alpha
Helix 17
AB8
A
378 386Right-handed alpha
Helix 18
AB9
A
397 410Right-handed alpha
Helix 19
AC1
A
413 422Right-handed alpha
Helix 20
AC2
A
437 441Right-handed 310
Helix 21
AC3
A
443 447Right-handed 310
Helix 22
AC4
A
449 471Right-handed alpha
Helix 23
AC5
A
641 655Right-handed alpha
Helix 24
AC6
A
683 694Right-handed alpha
Helix 25
AC7
A
695 699Right-handed 310
Helix 26
AC8
A
705 716Right-handed alpha
Helix 27
AC9
A
764 772Right-handed alpha
Helix 28
AD1
A
794 797Right-handed 310
Helix 29
AD2
A
798 803Right-handed alpha
Helix 30
AD3
A
803 815Right-handed alpha
Helix 31
AD4
A
850 857Right-handed alpha
Helix 32
AD5
A
932 939Right-handed alpha
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There are 6 sheets in PDB entry 5X2H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 31first strand
Strand 2
A
13 20anti-parallel
Strand 3
A
4 9anti-parallel
Strand 4
A
475 479parallel
Strand 5
A
679 681parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
303 305first strand
Strand 2
A
325 328anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
817 820first strand
Strand 2
A
823 826anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
844 849first strand
Strand 2
A
832 838anti-parallel
Strand 3
A
882 889anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
862 863first strand
Strand 2
A
876 877anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
948 953first strand
Strand 2
A
918 922anti-parallel
Strand 3
A
905 913anti-parallel
Strand 4
A
893 897anti-parallel
Strand 5
A
959 965anti-parallel
Strand 6
A
971 973anti-parallel
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