Analysis of interatomic Contacts of Structural Units in PDB entry:
5X2J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5X2J entry

There is 1 chain in PDB entry 5X2J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 199
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 5X2J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 30Right-handed alpha
Helix 2
AA2
A
30 44Right-handed alpha
Helix 3
AA3
A
46 51Right-handed 310
Helix 4
AA4
A
52 59Right-handed alpha
Helix 5
AA5
A
60 63Right-handed 310
Helix 6
AA6
A
64 66Right-handed 310
Helix 7
AA7
A
67 87Right-handed alpha
Helix 8
AA8
A
96 107Right-handed alpha
Helix 9
AA9
A
108 123Right-handed alpha
Helix 10
AB1
A
148 153Right-handed 310
Helix 11
AB2
A
163 166Right-handed 310
Helix 12
AB3
A
167 172Right-handed alpha
Helix 13
AB4
A
174 183Right-handed alpha
Helix 14
AB5
A
184 186Right-handed 310
Helix 15
AB6
A
187 198Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5X2J.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 144first strand
Strand 2
A
127 134anti-parallel
Strand 3
A
155 161anti-parallel
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