Analysis of interatomic Contacts of Structural Units in PDB entry:
5X2K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5X2K entry

There is 1 chain in PDB entry 5X2K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 696GLN 1020
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5X2K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
708 710Right-handed 310
Helix 2
AA2
A
752 769Right-handed alpha
Helix 3
AA3
A
798 805Right-handed alpha
Helix 4
AA4
A
810 832Right-handed alpha
Helix 5
AA5
A
882 889Right-handed alpha
Helix 6
AA6
A
892 909Right-handed alpha
Helix 7
AA7
A
919 930Right-handed alpha
Helix 8
AA8
A
940 951Right-handed alpha
Helix 9
AA9
A
954 958Right-handed 310
Helix 10
AB1
A
960 974Right-handed alpha
Helix 11
AB2
A
974 979Right-handed alpha
Helix 12
AB3
A
983 987Right-handed 310
Helix 13
AB4
A
995 1004Right-handed alpha
Helix 14
AB5
A
1012 1018Right-handed alpha
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There are 3 sheets in PDB entry 5X2K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
712 720first strand
Strand 2
A
725 731anti-parallel
Strand 3
A
740 746anti-parallel
Strand 4
A
786 791anti-parallel
Strand 5
A
777 782anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
796 797first strand
Strand 2
A
844 845anti-parallel
Strand 3
A
851 852anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
833 834first strand
Strand 2
A
860 861anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il