Analysis of interatomic Contacts of Structural Units in PDB entry:
5X3H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5X3H entry

There are 2 chains in PDB entry 5X3H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 10ARG 255
B
 ASN 8LEU 256
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 5X3H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 21Right-handed alpha
Helix 2
AA2
A
24 26Right-handed 310
Helix 3
AA3
A
27 36Right-handed alpha
Helix 4
AA4
A
39 49Right-handed alpha
Helix 5
AA5
A
55 59Right-handed 310
Helix 6
AA6
A
60 64Right-handed 310
Helix 7
AA7
A
67 71Right-handed 310
Helix 8
AA8
A
107 113Right-handed alpha
Helix 9
AA9
A
113 127Right-handed alpha
Helix 10
AB1
A
136 143Right-handed alpha
Helix 11
AB2
A
151 162Right-handed alpha
Helix 12
AB3
A
178 198Right-handed alpha
Helix 13
AB4
A
209 216Right-handed alpha
Helix 14
AB5
A
233 238Right-handed 310
Helix 15
AB6
A
239 247Right-handed alpha
Helix 16
AB7
A
248 250Right-handed 310
Helix 17
AB8
B
9 21Right-handed alpha
Helix 18
AB9
B
24 26Right-handed 310
Helix 19
AC1
B
27 36Right-handed alpha
Helix 20
AC2
B
39 49Right-handed alpha
Helix 21
AC3
B
55 59Right-handed 310
Helix 22
AC4
B
60 64Right-handed 310
Helix 23
AC5
B
67 71Right-handed 310
Helix 24
AC6
B
107 113Right-handed alpha
Helix 25
AC7
B
113 127Right-handed alpha
Helix 26
AC8
B
136 143Right-handed alpha
Helix 27
AC9
B
151 162Right-handed alpha
Helix 28
AD1
B
175 177Right-handed 310
Helix 29
AD2
B
178 197Right-handed alpha
Helix 30
AD3
B
209 216Right-handed alpha
Helix 31
AD4
B
233 238Right-handed 310
Helix 32
AD5
B
239 247Right-handed alpha
Helix 33
AD6
B
248 250Right-handed 310
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There are 4 sheets in PDB entry 5X3H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 168first strand
Strand 2
A
73 77parallel
Strand 3
A
203 207parallel
Strand 4
A
225 228parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 102first strand
Strand 2
A
105 106anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 168first strand
Strand 2
B
73 77parallel
Strand 3
B
203 207parallel
Strand 4
B
225 228parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
101 102first strand
Strand 2
B
105 106anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il