Analysis of interatomic Contacts of Structural Units in PDB entry:
5X4S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5X4S entry

There is 1 chain in PDB entry 5X4S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 18SER 289
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 5X4S

There are 5 sheets in PDB entry 5X4S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 34first strand
Strand 2
A
65 72anti-parallel
Strand 3
A
75 76anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 34first strand
Strand 2
A
65 72anti-parallel
Strand 3
A
250 256anti-parallel
Strand 4
A
87 93anti-parallel
Strand 5
A
179 190anti-parallel
Strand 6
A
193 205anti-parallel
Strand 7
A
217 222anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 59first strand
Strand 2
A
258 266anti-parallel
Strand 3
A
272 277anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 82first strand
Strand 2
A
230 239anti-parallel
Strand 3
A
100 104anti-parallel
Strand 4
A
113 118anti-parallel
Strand 5
A
123 141anti-parallel
Strand 6
A
147 164anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 82first strand
Strand 2
A
230 239anti-parallel
Strand 3
A
123 141parallel
Strand 4
A
147 164anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il