Analysis of interatomic Contacts of Structural Units in PDB entry:
5X50


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5X50 entry

There are 12 chains in PDB entry 5X50 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
TYR 6PRO 1457
B
THR 13SER 1224
C
SER 2ARG 266
D
GLU 23TYR 185
E
MET 1LEU 214
F
LEU 72ASN 155
G
MET 1ILE 171
H
SER 2ARG 145
I
ALA 2SER 114
J
MET 1PRO 64
K
MET 1LYS 112
L
TYR 27THR 72
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are142 helices in PDB entry 5X50. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
23 31Right-handed alpha
Helix 2
AA2
A
95 104Right-handed alpha
Helix 3
AA3
A
119 128Right-handed alpha
Helix 4
AA4
A
130 143Right-handed alpha
Helix 5
AA5
A
203 204Right-handed 310
Helix 6
AA6
A
207 207Right-handed 310
Helix 7
AA7
A
208 215Right-handed alpha
Helix 8
AA8
A
216 221Right-handed alpha
Helix 9
AA9
A
231 236Right-handed 310
Helix 10
AB1
A
262 267Right-handed alpha
Helix 11
AB2
A
267 279Right-handed alpha
Helix 12
AB3
A
290 306Right-handed alpha
Helix 13
AB4
A
335 341Right-handed alpha
Helix 14
AB5
A
369 373Right-handed alpha
Helix 15
AB6
A
385 395Right-handed alpha
Helix 16
AB7
A
452 454Right-handed 310
Helix 17
AB8
A
475 480Right-handed alpha
Helix 18
AB9
A
495 506Right-handed alpha
Helix 19
AC1
A
507 512Right-handed alpha
Helix 20
AC2
A
515 518Right-handed 310
Helix 21
AC3
A
525 537Right-handed alpha
Helix 22
AC4
A
544 554Right-handed alpha
Helix 23
AC5
A
575 580Right-handed alpha
Helix 24
AC6
A
581 583Right-handed 310
Helix 25
AC7
A
619 624Right-handed alpha
Helix 26
AC8
A
629 639Right-handed alpha
Helix 27
AC9
A
639 662Right-handed alpha
Helix 28
AD1
A
666 671Right-handed 310
Helix 29
AD2
A
675 697Right-handed alpha
Helix 30
AD3
A
710 736Right-handed alpha
Helix 31
AD4
A
742 750Right-handed alpha
Helix 32
AD5
A
755 764Right-handed alpha
Helix 33
AD6
A
794 799Right-handed alpha
Helix 34
AD7
A
810 828Right-handed alpha
Helix 35
AD8
A
830 845Right-handed alpha
Helix 36
AD9
A
868 872Right-handed 310
Helix 37
AE1
A
875 877Right-handed 310
Helix 38
AE2
A
890 899Right-handed alpha
Helix 39
AE3
A
916 921Right-handed alpha
Helix 40
AE4
A
925 945Right-handed alpha
Helix 41
AE5
A
961 973Right-handed alpha
Helix 42
AE6
A
984 999Right-handed alpha
Helix 43
AE7
A
1006 1016Right-handed alpha
Helix 44
AE8
A
1018 1027Right-handed alpha
Helix 45
AE9
A
1029 1036Right-handed alpha
Helix 46
AF1
A
1040 1059Right-handed alpha
Helix 47
AF2
A
1065 1080Right-handed alpha
Helix 48
AF3
A
1098 1108Right-handed alpha
Helix 49
AF4
A
1129 1138Right-handed alpha
Helix 50
AF5
A
1165 1168Right-handed 310
Helix 51
AF6
A
1169 1174Right-handed alpha
Helix 52
AF7
A
1201 1207Right-handed alpha
Helix 53
AF8
A
1210 1223Right-handed alpha
Helix 54
AF9
A
1258 1263Right-handed alpha
Helix 55
AG1
A
1264 1272Right-handed alpha
Helix 56
AG2
A
1334 1343Right-handed alpha
Helix 57
AG3
A
1343 1360Right-handed alpha
Helix 58
AG4
A
1361 1363Right-handed 310
Helix 59
AG5
A
1367 1381Right-handed alpha
Helix 60
AG6
A
1391 1395Right-handed 310
Helix 61
AG7
A
1398 1403Right-handed alpha
Helix 62
AG8
A
1407 1417Right-handed alpha
Helix 63
AG9
A
1426 1434Right-handed alpha
Helix 64
AH1
A
1439 1443Right-handed 310
Helix 65
AH2
A
1451 1456Right-handed alpha
Helix 66
AH3
B
14 28Right-handed alpha
Helix 67
AH4
B
31 43Right-handed alpha
Helix 68
AH5
B
45 51Right-handed alpha
Helix 69
AH6
B
100 108Right-handed alpha
Helix 70
AH7
B
170 174Right-handed 310
Helix 71
AH8
B
176 183Right-handed alpha
Helix 72
AH9
B
274 280Right-handed alpha
Helix 73
AI1
B
289 294Right-handed alpha
Helix 74
AI2
B
299 314Right-handed alpha
Helix 75
AI3
B
318 325Right-handed alpha
Helix 76
AI4
B
340 351Right-handed alpha
Helix 77
AI5
B
363 383Right-handed alpha
Helix 78
AI6
B
393 395Right-handed 310
Helix 79
AI7
B
401 419Right-handed alpha
Helix 80
AI8
B
420 425Right-handed alpha
Helix 81
AI9
B
444 456Right-handed alpha
Helix 82
AJ1
B
480 489Right-handed alpha
Helix 83
AJ2
B
544 549Right-handed alpha
Helix 84
AJ3
B
586 600Right-handed alpha
Helix 85
AJ4
B
612 614Right-handed 310
Helix 86
AJ5
B
648 655Right-handed alpha
Helix 87
AJ6
B
678 683Right-handed alpha
Helix 88
AJ7
B
692 696Right-handed alpha
Helix 89
AJ8
B
744 748Right-handed 310
Helix 90
AJ9
B
750 755Right-handed alpha
Helix 91
AK1
B
758 762Right-handed 310
Helix 92
AK2
B
763 774Right-handed alpha
Helix 93
AK3
B
775 777Right-handed 310
Helix 94
AK4
B
783 788Right-handed 310
Helix 95
AK5
B
806 812Right-handed 310
Helix 96
AK6
B
813 817Right-handed 310
Helix 97
AK7
B
842 848Right-handed alpha
Helix 98
AK8
B
1013 1017Right-handed 310
Helix 99
AK9
B
1023 1039Right-handed alpha
Helix 100
AL1
B
1051 1063Right-handed alpha
Helix 101
AL2
B
1098 1102Right-handed 310
Helix 102
AL3
B
1121 1125Right-handed 310
Helix 103
AL4
B
1131 1141Right-handed alpha
Helix 104
AL5
B
1143 1152Right-handed alpha
Helix 105
AL6
B
1197 1209Right-handed alpha
Helix 106
AL7
C
25 40Right-handed alpha
Helix 107
AL8
C
58 69Right-handed alpha
Helix 108
AL9
C
73 79Right-handed 310
Helix 109
AM1
C
116 118Right-handed 310
Helix 110
AM2
C
196 201Right-handed alpha
Helix 111
AM3
C
204 210Right-handed 310
Helix 112
AM4
C
241 264Right-handed alpha
Helix 113
AM5
D
54 71Right-handed alpha
Helix 114
AM6
D
86 94Right-handed alpha
Helix 115
AM7
D
100 112Right-handed alpha
Helix 116
AM8
D
119 129Right-handed alpha
Helix 117
AM9
D
139 148Right-handed alpha
Helix 118
AN1
D
152 160Right-handed alpha
Helix 119
AN2
D
170 180Right-handed alpha
Helix 120
AN3
E
5 26Right-handed alpha
Helix 121
AN4
E
30 35Right-handed alpha
Helix 122
AN5
E
38 43Right-handed alpha
Helix 123
AN6
E
53 57Right-handed 310
Helix 124
AN7
E
66 71Right-handed alpha
Helix 125
AN8
E
88 103Right-handed alpha
Helix 126
AN9
E
135 139Right-handed 310
Helix 127
AO1
E
159 168Right-handed alpha
Helix 128
AO2
E
181 187Right-handed alpha
Helix 129
AO3
F
86 103Right-handed alpha
Helix 130
AO4
F
116 127Right-handed alpha
Helix 131
AO5
G
14 18Right-handed 310
Helix 132
AO6
G
22 34Right-handed alpha
Helix 133
AO7
H
82 86Right-handed 310
Helix 134
AO8
I
20 23Right-handed 310
Helix 135
AO9
I
59 64Right-handed 310
Helix 136
AP1
J
16 27Right-handed alpha
Helix 137
AP2
J
31 38Right-handed alpha
Helix 138
AP3
J
42 51Right-handed alpha
Helix 139
AP4
J
55 61Right-handed alpha
Helix 140
AP5
K
5 9Right-handed 310
Helix 141
AP6
K
42 49Right-handed alpha
Helix 142
AP7
K
82 111Right-handed alpha
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There are 47 sheets in PDB entry 5X50. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1421 1422first strand
Strand 2
A
16 21anti-parallel
Strand 3
B
1212 1217anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
85 90first strand
Strand 2
A
237 239anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
176 178first strand
Strand 2
A
181 185anti-parallel
Strand 3
A
199 201anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1104 1106first strand
Strand 2
A
349 356anti-parallel
Strand 3
A
487 491anti-parallel
Strand 4
A
442 446anti-parallel
Strand 5
A
456 464anti-parallel
Strand 6
A
364 368parallel
Strand 7
A
468 471anti-parallel
Strand 8
A
349 356parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
378 380first strand
Strand 2
A
432 435anti-parallel
Strand 3
A
403 408anti-parallel
Strand 4
A
412 414anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
513 514first strand
Strand 2
A
519 520anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
541 543first strand
Strand 2
A
572 574anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
589 590first strand
Strand 2
A
607 609anti-parallel
Strand 3
A
612 615anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
767 768first strand
Strand 2
A
800 801anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
850 851first strand
Strand 2
A
857 858anti-parallel
Strand 3
A
864 866anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
879 883first strand
Strand 2
A
955 959anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1285 1290first strand
Strand 2
A
1306 1311anti-parallel
Strand 3
A
1118 1121anti-parallel
Strand 4
A
1331 1332anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1143 1144first strand
Strand 2
A
1275 1277anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1149 1153first strand
Strand 2
A
1196 1199anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1227 1228first strand
Strand 2
A
1242 1243anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1293 1295first strand
Strand 2
A
1301 1303anti-parallel
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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
143 147first strand
Strand 2
F
133 137anti-parallel
Strand 3
A
1445 1448anti-parallel
Strand 4
G
59 61anti-parallel
Strand 5
G
68 73anti-parallel
Strand 6
G
8 13anti-parallel
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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
82 84first strand
Strand 2
B
112 117anti-parallel
Strand 3
B
157 162anti-parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
89 90first strand
Strand 2
B
96 97anti-parallel
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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
194 195first strand
Strand 2
B
200 202anti-parallel
Strand 3
B
474 475anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
397 400first strand
Strand 2
B
205 209anti-parallel
Strand 3
B
490 492parallel
Strand 4
B
530 531anti-parallel
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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
217 218first strand
Strand 2
B
227 233anti-parallel
Strand 3
B
243 247anti-parallel
Strand 4
B
262 264anti-parallel
Strand 5
B
272 273anti-parallel
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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
537 538first strand
Strand 2
B
626 632anti-parallel
Strand 3
B
687 691anti-parallel
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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
537 538first strand
Strand 2
B
626 632anti-parallel
Strand 3
B
740 742anti-parallel
Strand 4
B
700 701parallel
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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
578 583first strand
Strand 2
B
571 575anti-parallel
Strand 3
B
616 620parallel
Strand 4
B
607 610anti-parallel
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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
793 796first strand
Strand 2
B
853 861anti-parallel
Strand 3
B
963 969anti-parallel
Strand 4
B
947 955anti-parallel
Strand 5
B
904 905anti-parallel
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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
793 796first strand
Strand 2
B
853 861anti-parallel
Strand 3
B
971 972anti-parallel
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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
804 805first strand
Strand 2
B
1042 1043parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
821 823first strand
Strand 2
B
1090 1092anti-parallel
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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
826 827first strand
Strand 2
B
1086 1087anti-parallel
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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
979 980first strand
Strand 2
B
988 992anti-parallel
Strand 3
B
838 841parallel
Strand 4
B
1010 1011anti-parallel
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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
915 916first strand
Strand 2
B
935 936anti-parallel
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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1159 1163first strand
Strand 2
B
1191 1195anti-parallel
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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
6 12first strand
Strand 2
C
17 22anti-parallel
Strand 3
C
228 232anti-parallel
Strand 4
C
176 179anti-parallel
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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
52 53first strand
Strand 2
C
153 160anti-parallel
Strand 3
C
96 101anti-parallel
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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
52 53first strand
Strand 2
C
153 160anti-parallel
Strand 3
C
44 50anti-parallel
Strand 4
L
67 69anti-parallel
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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
111 114first strand
Strand 2
C
143 147anti-parallel
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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
37 39first strand
Strand 2
D
45 47anti-parallel
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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
59 60first strand
Strand 2
E
76 80anti-parallel
Strand 3
E
105 109parallel
Strand 4
E
130 133parallel
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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
151 154first strand
Strand 2
E
194 201anti-parallel
Strand 3
E
205 213anti-parallel
Strand 4
E
176 177parallel
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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
3 5first strand
Strand 2
G
76 79anti-parallel
Strand 3
G
43 48anti-parallel
Strand 4
G
38 39anti-parallel
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There are 7 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
150 152first strand
Strand 2
G
157 161anti-parallel
Strand 3
G
108 111parallel
Strand 4
G
98 102anti-parallel
Strand 5
G
86 95anti-parallel
Strand 6
G
142 146anti-parallel
Strand 7
G
169 170anti-parallel
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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
120 121first strand
Strand 2
G
130 131anti-parallel
Strand 3
G
136 137anti-parallel
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There are 8 strands in AE8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
99 105first strand
Strand 2
H
111 117anti-parallel
Strand 3
H
120 124anti-parallel
Strand 4
H
37 42anti-parallel
Strand 5
H
24 30anti-parallel
Strand 6
H
7 16anti-parallel
Strand 7
H
54 58anti-parallel
Strand 8
H
142 144anti-parallel
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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
15 18first strand
Strand 2
I
25 28anti-parallel
Strand 3
I
35 37anti-parallel
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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
83 86first strand
Strand 2
I
100 103anti-parallel
Strand 3
I
110 111anti-parallel
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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
19 23first strand
Strand 2
K
30 36anti-parallel
Strand 3
K
70 77anti-parallel
Strand 4
K
56 62anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il