Analysis of interatomic Contacts of Structural Units in PDB entry:
5X58

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5X58 entry

There are 3 chains in PDB entry 5X58 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 18	VAL 1104
B	ARG 18	VAL 1104
C	ARG 18	VAL 1104

There are 54 helices in PDB entry 5X58. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	281	291	Right-handed alpha
Helix 2	AA2	A	324	327	Right-handed 310
Helix 3	AA3	A	390	397	Right-handed alpha
Helix 4	AA4	A	488	492	Right-handed 310
Helix 5	AA5	A	603	611	Right-handed alpha
Helix 6	AA6	A	719	726	Right-handed alpha
Helix 7	AA7	A	729	736	Right-handed alpha
Helix 8	AA8	A	737	739	Right-handed 310
Helix 9	AA9	A	744	765	Right-handed alpha
Helix 10	AB1	A	798	807	Right-handed alpha
Helix 11	AB2	A	848	866	Right-handed alpha
Helix 12	AB3	A	868	873	Right-handed alpha
Helix 13	AB4	A	879	892	Right-handed alpha
Helix 14	AB5	A	895	901	Right-handed alpha
Helix 15	AB6	A	901	923	Right-handed alpha
Helix 16	AB7	A	925	947	Right-handed alpha
Helix 17	AB8	A	958	964	Right-handed alpha
Helix 18	AB9	A	970	1014	Right-handed alpha
Helix 19	AC1	B	281	291	Right-handed alpha
Helix 20	AC2	B	324	327	Right-handed 310
Helix 21	AC3	B	390	397	Right-handed alpha
Helix 22	AC4	B	488	492	Right-handed 310
Helix 23	AC5	B	603	611	Right-handed alpha
Helix 24	AC6	B	719	726	Right-handed alpha
Helix 25	AC7	B	729	736	Right-handed alpha
Helix 26	AC8	B	737	739	Right-handed 310
Helix 27	AC9	B	744	765	Right-handed alpha
Helix 28	AD1	B	798	807	Right-handed alpha
Helix 29	AD2	B	848	866	Right-handed alpha
Helix 30	AD3	B	868	873	Right-handed alpha
Helix 31	AD4	B	879	892	Right-handed alpha
Helix 32	AD5	B	895	901	Right-handed alpha
Helix 33	AD6	B	901	923	Right-handed alpha
Helix 34	AD7	B	925	947	Right-handed alpha
Helix 35	AD8	B	958	964	Right-handed alpha
Helix 36	AD9	B	970	1014	Right-handed alpha
Helix 37	AE1	C	281	291	Right-handed alpha
Helix 38	AE2	C	324	327	Right-handed 310
Helix 39	AE3	C	390	397	Right-handed alpha
Helix 40	AE4	C	488	492	Right-handed 310
Helix 41	AE5	C	603	611	Right-handed alpha
Helix 42	AE6	C	719	726	Right-handed alpha
Helix 43	AE7	C	729	736	Right-handed alpha
Helix 44	AE8	C	737	739	Right-handed 310
Helix 45	AE9	C	744	765	Right-handed alpha
Helix 46	AF1	C	798	807	Right-handed alpha
Helix 47	AF2	C	848	866	Right-handed alpha
Helix 48	AF3	C	868	873	Right-handed alpha
Helix 49	AF4	C	879	892	Right-handed alpha
Helix 50	AF5	C	895	901	Right-handed alpha
Helix 51	AF6	C	901	923	Right-handed alpha
Helix 52	AF7	C	925	947	Right-handed alpha
Helix 53	AF8	C	958	964	Right-handed alpha
Helix 54	AF9	C	970	1014	Right-handed alpha

There are 45 sheets in PDB entry 5X58. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	34	first strand
Strand 2	A	65	71	anti-parallel
Strand 3	A	250	256	anti-parallel
Strand 4	A	87	93	anti-parallel
Strand 5	A	181	190	anti-parallel
Strand 6	A	193	200	anti-parallel
Strand 7	A	213	223	anti-parallel
Strand 8	A	37	41	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	48	first strand
Strand 2	C	551	553	parallel
Strand 3	C	559	563	anti-parallel
Strand 4	C	570	574	anti-parallel
Strand 5	C	537	540	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	52	59	first strand
Strand 2	A	258	265	anti-parallel
Strand 3	A	274	277	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	82	first strand
Strand 2	A	230	233	anti-parallel
Strand 3	A	101	104	anti-parallel
Strand 4	A	113	118	anti-parallel
Strand 5	A	122	130	anti-parallel
Strand 6	A	156	167	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	147	150	first strand
Strand 2	A	138	141	anti-parallel
Strand 3	A	238	239	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	298	299	first strand
Strand 2	A	583	585	anti-parallel
Strand 3	A	596	599	anti-parallel
Strand 4	A	635	636	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	310	312	first strand
Strand 2	A	525	527	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	321	322	first strand
Strand 2	A	348	349	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	341	345	first strand
Strand 2	A	382	389	anti-parallel
Strand 3	A	494	500	anti-parallel
Strand 4	A	419	424	anti-parallel
Strand 5	A	363	366	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	537	540	first strand
Strand 2	A	570	574	anti-parallel
Strand 3	A	559	563	anti-parallel
Strand 4	A	551	553	anti-parallel
Strand 5	B	46	48	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	640	641	first strand
Strand 2	A	675	678	parallel
Strand 3	A	656	659	anti-parallel
Strand 4	A	650	653	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	683	685	first strand
Strand 2	B	769	771	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	693	697	first strand
Strand 2	A	1054	1059	anti-parallel
Strand 3	A	1078	1080	anti-parallel
Strand 4	A	1083	1085	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	704	710	first strand
Strand 2	A	1041	1048	anti-parallel
Strand 3	A	1030	1032	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	704	710	first strand
Strand 2	A	1041	1048	anti-parallel
Strand 3	A	1035	1038	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	769	771	first strand
Strand 2	C	683	685	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1071	1072	first strand
Strand 2	A	1102	1103	anti-parallel

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There are 8 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	34	first strand
Strand 2	B	65	71	anti-parallel
Strand 3	B	250	256	anti-parallel
Strand 4	B	87	93	anti-parallel
Strand 5	B	181	190	anti-parallel
Strand 6	B	193	200	anti-parallel
Strand 7	B	213	223	anti-parallel
Strand 8	B	37	41	parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	59	first strand
Strand 2	B	258	265	anti-parallel
Strand 3	B	274	277	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	81	82	first strand
Strand 2	B	230	233	anti-parallel
Strand 3	B	101	104	anti-parallel
Strand 4	B	113	118	anti-parallel
Strand 5	B	122	130	anti-parallel
Strand 6	B	156	167	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	147	150	first strand
Strand 2	B	138	141	anti-parallel
Strand 3	B	238	239	parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	298	299	first strand
Strand 2	B	583	585	anti-parallel
Strand 3	B	596	599	anti-parallel
Strand 4	B	635	636	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	310	312	first strand
Strand 2	B	525	527	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	321	322	first strand
Strand 2	B	348	349	parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	341	345	first strand
Strand 2	B	382	389	anti-parallel
Strand 3	B	494	500	anti-parallel
Strand 4	B	419	424	anti-parallel
Strand 5	B	363	366	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	537	540	first strand
Strand 2	B	570	574	anti-parallel
Strand 3	B	559	563	anti-parallel
Strand 4	B	551	553	anti-parallel
Strand 5	C	46	48	parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	640	641	first strand
Strand 2	B	675	678	parallel
Strand 3	B	656	659	anti-parallel
Strand 4	B	650	653	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	683	685	first strand
Strand 2	C	769	771	parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	693	697	first strand
Strand 2	B	1054	1059	anti-parallel
Strand 3	B	1078	1080	anti-parallel
Strand 4	B	1083	1085	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	704	710	first strand
Strand 2	B	1041	1048	anti-parallel
Strand 3	B	1030	1032	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	704	710	first strand
Strand 2	B	1041	1048	anti-parallel
Strand 3	B	1035	1038	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1071	1072	first strand
Strand 2	B	1102	1103	anti-parallel

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There are 8 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	32	34	first strand
Strand 2	C	65	71	anti-parallel
Strand 3	C	250	256	anti-parallel
Strand 4	C	87	93	anti-parallel
Strand 5	C	181	190	anti-parallel
Strand 6	C	193	200	anti-parallel
Strand 7	C	213	223	anti-parallel
Strand 8	C	37	41	parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	52	59	first strand
Strand 2	C	258	265	anti-parallel
Strand 3	C	274	277	anti-parallel

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There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	81	82	first strand
Strand 2	C	230	233	anti-parallel
Strand 3	C	101	104	anti-parallel
Strand 4	C	113	118	anti-parallel
Strand 5	C	122	130	anti-parallel
Strand 6	C	156	167	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	147	150	first strand
Strand 2	C	138	141	anti-parallel
Strand 3	C	238	239	parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	298	299	first strand
Strand 2	C	583	585	anti-parallel
Strand 3	C	596	599	anti-parallel
Strand 4	C	635	636	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	310	312	first strand
Strand 2	C	525	527	parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	321	322	first strand
Strand 2	C	348	349	parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	341	345	first strand
Strand 2	C	382	389	anti-parallel
Strand 3	C	494	500	anti-parallel
Strand 4	C	419	424	anti-parallel
Strand 5	C	363	366	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	640	641	first strand
Strand 2	C	675	678	parallel
Strand 3	C	656	659	anti-parallel
Strand 4	C	650	653	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	693	697	first strand
Strand 2	C	1054	1059	anti-parallel
Strand 3	C	1078	1080	anti-parallel
Strand 4	C	1083	1085	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	704	710	first strand
Strand 2	C	1041	1048	anti-parallel
Strand 3	C	1030	1032	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	704	710	first strand
Strand 2	C	1041	1048	anti-parallel
Strand 3	C	1035	1038	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1071	1072	first strand
Strand 2	C	1102	1103	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5X58

Analysis of interatomic Contacts of Structural Units in PDB entry:
5X58