Analysis of interatomic Contacts of Structural Units in PDB entry:
5X67


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5X67 entry

There are 2 chains in PDB entry 5X67 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 28VAL 313
B
 PRO 26VAL 313
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5X67. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 44Right-handed alpha
Helix 2
AA2
A
80 93Right-handed alpha
Helix 3
AA3
A
97 103Right-handed alpha
Helix 4
AA4
A
110 113Right-handed 310
Helix 5
AA5
A
114 121Right-handed alpha
Helix 6
AA6
A
134 142Right-handed alpha
Helix 7
AA7
A
159 171Right-handed alpha
Helix 8
AA8
A
186 190Right-handed 310
Helix 9
AA9
A
222 242Right-handed alpha
Helix 10
AB1
A
261 270Right-handed alpha
Helix 11
AB2
A
287 291Right-handed 310
Helix 12
AB3
A
292 294Right-handed 310
Helix 13
AB4
B
29 44Right-handed alpha
Helix 14
AB5
B
80 93Right-handed alpha
Helix 15
AB6
B
98 103Right-handed alpha
Helix 16
AB7
B
109 114Right-handed alpha
Helix 17
AB8
B
114 121Right-handed alpha
Helix 18
AB9
B
134 142Right-handed alpha
Helix 19
AC1
B
159 171Right-handed alpha
Helix 20
AC2
B
186 190Right-handed 310
Helix 21
AC3
B
221 242Right-handed alpha
Helix 22
AC4
B
261 270Right-handed alpha
Helix 23
AC5
B
287 291Right-handed 310
Helix 24
AC6
B
292 294Right-handed 310
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There are 4 sheets in PDB entry 5X67. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 47first strand
Strand 2
A
55 66anti-parallel
Strand 3
A
244 258anti-parallel
Strand 4
A
207 218parallel
Strand 5
A
196 204anti-parallel
Strand 6
A
178 180anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 281first strand
Strand 2
A
296 299anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 47first strand
Strand 2
B
55 66anti-parallel
Strand 3
B
244 258anti-parallel
Strand 4
B
207 218parallel
Strand 5
B
196 204anti-parallel
Strand 6
B
178 180anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
278 281first strand
Strand 2
B
296 299anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il