Analysis of interatomic Contacts of Structural Units in PDB entry:
5X7Q

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5X7Q entry

There are 2 chains in PDB entry 5X7Q (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 35	PRO 1281
B	MET 35	PRO 1281

There are 51 helices in PDB entry 5X7Q. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	81	84	Right-handed 310
Helix 2	AA2	A	254	267	Right-handed alpha
Helix 3	AA3	A	273	278	Right-handed 310
Helix 4	AA4	A	287	301	Right-handed alpha
Helix 5	AA5	A	312	315	Right-handed 310
Helix 6	AA6	A	322	326	Right-handed 310
Helix 7	AA7	A	332	337	Right-handed 310
Helix 8	AA8	A	338	347	Right-handed alpha
Helix 9	AA9	A	369	379	Right-handed alpha
Helix 10	AB1	A	404	421	Right-handed alpha
Helix 11	AB2	A	446	463	Right-handed alpha
Helix 12	AB3	A	479	484	Right-handed 310
Helix 13	AB4	A	510	521	Right-handed alpha
Helix 14	AB5	A	537	541	Right-handed 310
Helix 15	AB6	A	545	557	Right-handed alpha
Helix 16	AB7	A	573	577	Right-handed 310
Helix 17	AB8	A	578	595	Right-handed alpha
Helix 18	AB9	A	595	610	Right-handed alpha
Helix 19	AC1	A	616	621	Right-handed alpha
Helix 20	AC2	A	624	628	Right-handed 310
Helix 21	AC3	A	739	744	Right-handed 310
Helix 22	AC4	A	802	809	Right-handed alpha
Helix 23	AC5	A	857	859	Right-handed 310
Helix 24	AC6	A	967	971	Right-handed 310
Helix 25	AC7	A	995	997	Right-handed 310
Helix 26	AC8	A	1123	1127	Right-handed 310
Helix 27	AC9	B	81	84	Right-handed 310
Helix 28	AD1	B	254	267	Right-handed alpha
Helix 29	AD2	B	273	278	Right-handed 310
Helix 30	AD3	B	287	301	Right-handed alpha
Helix 31	AD4	B	312	315	Right-handed 310
Helix 32	AD5	B	322	326	Right-handed 310
Helix 33	AD6	B	332	337	Right-handed 310
Helix 34	AD7	B	338	347	Right-handed alpha
Helix 35	AD8	B	369	379	Right-handed alpha
Helix 36	AD9	B	404	421	Right-handed alpha
Helix 37	AE1	B	446	463	Right-handed alpha
Helix 38	AE2	B	479	484	Right-handed 310
Helix 39	AE3	B	510	521	Right-handed alpha
Helix 40	AE4	B	537	541	Right-handed 310
Helix 41	AE5	B	545	557	Right-handed alpha
Helix 42	AE6	B	573	577	Right-handed 310
Helix 43	AE7	B	578	595	Right-handed alpha
Helix 44	AE8	B	595	609	Right-handed alpha
Helix 45	AE9	B	616	621	Right-handed alpha
Helix 46	AF1	B	739	744	Right-handed 310
Helix 47	AF2	B	802	809	Right-handed alpha
Helix 48	AF3	B	857	859	Right-handed 310
Helix 49	AF4	B	967	971	Right-handed 310
Helix 50	AF5	B	995	997	Right-handed 310
Helix 51	AF6	B	1123	1127	Right-handed 310

There are 32 sheets in PDB entry 5X7Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	47	first strand
Strand 2	A	50	55	anti-parallel
Strand 3	A	63	71	anti-parallel
Strand 4	A	74	80	anti-parallel
Strand 5	A	246	252	anti-parallel
Strand 6	A	208	212	anti-parallel
Strand 7	A	198	204	anti-parallel
Strand 8	A	165	169	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	105	107	first strand
Strand 2	A	113	116	anti-parallel
Strand 3	A	120	125	anti-parallel
Strand 4	A	130	135	anti-parallel
Strand 5	A	140	143	anti-parallel
Strand 6	A	154	159	anti-parallel
Strand 7	A	226	230	anti-parallel
Strand 8	A	218	221	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	526	527	first strand
Strand 2	B	486	488	parallel
Strand 3	B	471	473	parallel
Strand 4	B	423	428	parallel
Strand 5	A	350	355	parallel
Strand 6	A	307	310	parallel
Strand 7	A	280	283	parallel
Strand 8	B	563	564	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	358	362	first strand
Strand 2	B	394	399	anti-parallel
Strand 3	A	388	391	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	358	362	first strand
Strand 2	A	394	399	anti-parallel
Strand 3	B	388	391	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	526	527	first strand
Strand 2	A	486	488	parallel
Strand 3	A	471	473	parallel
Strand 4	A	423	428	parallel
Strand 5	B	350	355	parallel
Strand 6	B	307	310	parallel
Strand 7	B	280	283	parallel
Strand 8	A	563	564	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	614	615	first strand
Strand 2	A	634	636	anti-parallel
Strand 3	A	640	642	anti-parallel
Strand 4	A	691	694	anti-parallel
Strand 5	A	661	664	anti-parallel
Strand 6	A	670	672	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	652	657	first strand
Strand 2	A	675	680	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	698	701	first strand
Strand 2	A	715	720	anti-parallel
Strand 3	A	777	783	parallel
Strand 4	A	822	830	anti-parallel
Strand 5	A	813	819	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	727	733	first strand
Strand 2	A	747	755	anti-parallel
Strand 3	A	759	764	anti-parallel
Strand 4	A	837	842	anti-parallel
Strand 5	A	789	792	anti-parallel
Strand 6	A	795	796	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	851	855	first strand
Strand 2	A	977	984	anti-parallel
Strand 3	A	904	914	anti-parallel
Strand 4	A	946	955	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	851	855	first strand
Strand 2	A	977	984	anti-parallel
Strand 3	A	904	914	anti-parallel
Strand 4	A	989	993	anti-parallel
Strand 5	A	1109	1116	anti-parallel
Strand 6	A	1038	1047	anti-parallel
Strand 7	A	1081	1089	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	860	862	first strand
Strand 2	A	894	901	anti-parallel
Strand 3	A	958	965	anti-parallel
Strand 4	A	921	927	anti-parallel
Strand 5	A	930	937	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	871	873	first strand
Strand 2	A	884	886	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	998	1000	first strand
Strand 2	A	1027	1034	anti-parallel
Strand 3	A	1092	1099	anti-parallel
Strand 4	A	1054	1060	anti-parallel
Strand 5	A	1066	1070	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1004	1006	first strand
Strand 2	A	1017	1019	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1146	1148	first strand
Strand 2	A	1186	1195	anti-parallel
Strand 3	A	1255	1264	anti-parallel
Strand 4	A	1218	1224	anti-parallel
Strand 5	A	1231	1234	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1157	1160	first strand
Strand 2	A	1177	1181	anti-parallel
Strand 3	A	1268	1279	anti-parallel
Strand 4	A	1201	1213	anti-parallel
Strand 5	A	1242	1251	anti-parallel

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There are 8 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	47	first strand
Strand 2	B	50	55	anti-parallel
Strand 3	B	63	71	anti-parallel
Strand 4	B	74	80	anti-parallel
Strand 5	B	246	252	anti-parallel
Strand 6	B	208	212	anti-parallel
Strand 7	B	198	204	anti-parallel
Strand 8	B	165	169	anti-parallel

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There are 8 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	105	107	first strand
Strand 2	B	113	116	anti-parallel
Strand 3	B	120	125	anti-parallel
Strand 4	B	130	135	anti-parallel
Strand 5	B	140	143	anti-parallel
Strand 6	B	154	159	anti-parallel
Strand 7	B	226	230	anti-parallel
Strand 8	B	218	221	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	614	615	first strand
Strand 2	B	634	636	anti-parallel
Strand 3	B	640	642	anti-parallel
Strand 4	B	691	694	anti-parallel
Strand 5	B	661	664	anti-parallel
Strand 6	B	670	672	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	652	657	first strand
Strand 2	B	675	680	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	698	701	first strand
Strand 2	B	715	720	anti-parallel
Strand 3	B	777	783	parallel
Strand 4	B	822	830	anti-parallel
Strand 5	B	813	819	anti-parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	727	733	first strand
Strand 2	B	747	755	anti-parallel
Strand 3	B	759	764	anti-parallel
Strand 4	B	837	842	anti-parallel
Strand 5	B	789	792	anti-parallel
Strand 6	B	795	796	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	851	855	first strand
Strand 2	B	977	984	anti-parallel
Strand 3	B	904	914	anti-parallel
Strand 4	B	946	955	anti-parallel

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There are 7 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	851	855	first strand
Strand 2	B	977	984	anti-parallel
Strand 3	B	904	914	anti-parallel
Strand 4	B	989	993	anti-parallel
Strand 5	B	1109	1116	anti-parallel
Strand 6	B	1038	1047	anti-parallel
Strand 7	B	1081	1089	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	860	862	first strand
Strand 2	B	894	901	anti-parallel
Strand 3	B	958	965	anti-parallel
Strand 4	B	921	927	anti-parallel
Strand 5	B	930	937	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	871	873	first strand
Strand 2	B	884	886	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	998	1000	first strand
Strand 2	B	1027	1034	anti-parallel
Strand 3	B	1092	1099	anti-parallel
Strand 4	B	1054	1060	anti-parallel
Strand 5	B	1066	1070	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1004	1006	first strand
Strand 2	B	1017	1019	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1146	1148	first strand
Strand 2	B	1186	1195	anti-parallel
Strand 3	B	1255	1264	anti-parallel
Strand 4	B	1218	1224	anti-parallel
Strand 5	B	1231	1234	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1157	1160	first strand
Strand 2	B	1177	1181	anti-parallel
Strand 3	B	1268	1279	anti-parallel
Strand 4	B	1201	1213	anti-parallel
Strand 5	B	1241	1251	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5X7Q

Analysis of interatomic Contacts of Structural Units in PDB entry:
5X7Q