Analysis of interatomic Contacts of Structural Units in PDB entry:
5X7U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5X7U entry

There is 1 chain in PDB entry 5X7U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 4HIS 549
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 5X7U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 11Right-handed 310
Helix 2
AA2
A
17 22Right-handed alpha
Helix 3
AA3
A
31 38Right-handed alpha
Helix 4
AA4
A
38 46Right-handed alpha
Helix 5
AA5
A
75 78Right-handed 310
Helix 6
AA6
A
79 93Right-handed alpha
Helix 7
AA7
A
110 117Right-handed alpha
Helix 8
AA8
A
124 128Right-handed 310
Helix 9
AA9
A
177 194Right-handed alpha
Helix 10
AB1
A
203 207Right-handed 310
Helix 11
AB2
A
218 236Right-handed alpha
Helix 12
AB3
A
248 254Right-handed alpha
Helix 13
AB4
A
255 257Right-handed 310
Helix 14
AB5
A
269 281Right-handed alpha
Helix 15
AB6
A
283 292Right-handed alpha
Helix 16
AB7
A
318 330Right-handed alpha
Helix 17
AB8
A
332 336Right-handed 310
Helix 18
AB9
A
344 349Right-handed alpha
Helix 19
AC1
A
352 366Right-handed alpha
Helix 20
AC2
A
375 379Right-handed 310
Helix 21
AC3
A
389 393Right-handed 310
Helix 22
AC4
A
401 406Right-handed 310
Helix 23
AC5
A
410 414Right-handed 310
Helix 24
AC6
A
430 436Right-handed alpha
Helix 25
AC7
A
440 454Right-handed alpha
Helix 26
AC8
A
456 461Right-handed alpha
Helix 27
AC9
A
502 506Right-handed 310
Helix 28
AD1
A
543 547Right-handed 310
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There are 6 sheets in PDB entry 5X7U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 16first strand
Strand 2
A
49 52parallel
Strand 3
A
96 101parallel
Strand 4
A
198 201parallel
Strand 5
A
240 243parallel
Strand 6
A
264 266parallel
Strand 7
A
301 305parallel
Strand 8
A
369 373parallel
Strand 9
A
13 16parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 57first strand
Strand 2
A
69 73anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 131first strand
Strand 2
A
160 163anti-parallel
Strand 3
A
152 155anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 313first strand
Strand 2
A
340 341anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
462 465first strand
Strand 2
A
473 480anti-parallel
Strand 3
A
483 490anti-parallel
Strand 4
A
536 542anti-parallel
Strand 5
A
509 512anti-parallel
Strand 6
A
517 518anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
496 500first strand
Strand 2
A
527 531anti-parallel
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