Analysis of interatomic Contacts of Structural Units in PDB entry:
5X83

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5X83 entry

There are 4 chains in PDB entry 5X83 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 723	GLY 816
B	GLY 837	PHE 1042
C	SER 723	SER 817
D	MET 838	GLN 1043

There are 4 helices in PDB entry 5X83. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	985	989	Right-handed 310
Helix 2	AA2	B	1037	1042	Right-handed alpha
Helix 3	AA3	D	985	989	Right-handed 310
Helix 4	AA4	D	1037	1042	Right-handed alpha

There are 18 sheets in PDB entry 5X83. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	731	736	first strand
Strand 2	A	741	746	anti-parallel
Strand 3	A	780	783	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	770	775	first strand
Strand 2	A	757	764	anti-parallel
Strand 3	A	791	800	anti-parallel
Strand 4	A	803	804	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	770	775	first strand
Strand 2	A	757	764	anti-parallel
Strand 3	A	791	800	anti-parallel
Strand 4	A	808	813	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	842	848	first strand
Strand 2	B	854	859	anti-parallel
Strand 3	B	898	901	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	890	894	first strand
Strand 2	B	874	881	anti-parallel
Strand 3	B	909	918	anti-parallel
Strand 4	B	921	922	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	890	894	first strand
Strand 2	B	874	881	anti-parallel
Strand 3	B	909	918	anti-parallel
Strand 4	B	929	932	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	943	949	first strand
Strand 2	B	957	962	anti-parallel
Strand 3	B	1000	1003	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	990	995	first strand
Strand 2	B	971	979	anti-parallel
Strand 3	B	1011	1020	anti-parallel
Strand 4	B	1023	1024	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	990	995	first strand
Strand 2	B	971	979	anti-parallel
Strand 3	B	1011	1020	anti-parallel
Strand 4	B	1031	1034	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	731	736	first strand
Strand 2	C	741	746	anti-parallel
Strand 3	C	780	783	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	770	775	first strand
Strand 2	C	757	764	anti-parallel
Strand 3	C	791	800	anti-parallel
Strand 4	C	803	804	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	770	775	first strand
Strand 2	C	757	764	anti-parallel
Strand 3	C	791	800	anti-parallel
Strand 4	C	808	813	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	842	848	first strand
Strand 2	D	854	859	anti-parallel
Strand 3	D	898	901	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	890	894	first strand
Strand 2	D	874	881	anti-parallel
Strand 3	D	909	918	anti-parallel
Strand 4	D	921	922	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	890	894	first strand
Strand 2	D	874	881	anti-parallel
Strand 3	D	909	918	anti-parallel
Strand 4	D	929	932	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	943	949	first strand
Strand 2	D	957	962	anti-parallel
Strand 3	D	1000	1003	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	990	995	first strand
Strand 2	D	971	979	anti-parallel
Strand 3	D	1011	1020	anti-parallel
Strand 4	D	1023	1024	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	990	995	first strand
Strand 2	D	971	979	anti-parallel
Strand 3	D	1011	1020	anti-parallel
Strand 4	D	1031	1034	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5X83

Analysis of interatomic Contacts of Structural Units in PDB entry:
5X83