Analysis of interatomic Contacts of Structural Units in PDB entry:
5X89


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5X89 entry

There is 1 chain in PDB entry 5X89 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 14LEU 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5X89. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 37Right-handed alpha
Helix 2
AA2
A
51 61Right-handed alpha
Helix 3
AA3
A
74 86Right-handed alpha
Helix 4
AA4
A
88 102Right-handed alpha
Helix 5
AA5
A
110 114Right-handed 310
Helix 6
AA6
A
140 151Right-handed alpha
Helix 7
AA7
A
207 213Right-handed alpha
Helix 8
AA8
A
226 236Right-handed alpha
Helix 9
AA9
A
250 260Right-handed alpha
Helix 10
AB1
A
264 278Right-handed alpha
Helix 11
AB2
A
286 289Right-handed 310
Helix 12
AB3
A
318 332Right-handed alpha
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There are 4 sheets in PDB entry 5X89. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 50first strand
Strand 2
A
23 26anti-parallel
Strand 3
A
15 20anti-parallel
Strand 4
A
64 68parallel
Strand 5
A
71 73anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 108first strand
Strand 2
A
116 120anti-parallel
Strand 3
A
124 132anti-parallel
Strand 4
A
156 162parallel
Strand 5
A
168 176anti-parallel
Strand 6
A
348 357anti-parallel
Strand 7
A
335 343anti-parallel
Strand 8
A
306 311parallel
Strand 9
A
292 295anti-parallel
Strand 10
A
281 284anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 139first strand
Strand 2
A
316 317anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 219first strand
Strand 2
A
222 225anti-parallel
Strand 3
A
200 203anti-parallel
Strand 4
A
193 197anti-parallel
Strand 5
A
240 242parallel
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