Analysis of interatomic Contacts of Structural Units in PDB entry:
5X94


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5X94 entry

There are 9 chains in PDB entry 5X94 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 4THR 219
B
 SER 3ARG 220
L
 PRO 954ILE 955
L
 ALA 957ASP 962
M
 ILE 955ILE 955
M
 ALA 957PHE 961
N
 ALA 950ILE 955
N
 ALA 957ASP 962
O
 ALA 957ASP 962
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 5X94. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 23Right-handed alpha
Helix 2
AA2
A
73 84Right-handed alpha
Helix 3
AA3
A
118 129Right-handed alpha
Helix 4
AA4
A
189 200Right-handed alpha
Helix 5
AA5
B
12 23Right-handed alpha
Helix 6
AA6
B
73 83Right-handed alpha
Helix 7
AA7
B
118 129Right-handed alpha
Helix 8
AA8
B
189 200Right-handed alpha
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There are 8 sheets in PDB entry 5X94. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 64first strand
Strand 2
A
50 58anti-parallel
Strand 3
A
41 47anti-parallel
Strand 4
A
28 33anti-parallel
Strand 5
A
100 101parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 64first strand
Strand 2
A
50 58anti-parallel
Strand 3
L
955 956parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 115first strand
Strand 2
A
134 139parallel
Strand 3
A
147 153anti-parallel
Strand 4
A
166 174anti-parallel
Strand 5
A
179 180anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 115first strand
Strand 2
A
134 139parallel
Strand 3
A
214 215parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 203first strand
Strand 2
A
209 210anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
63 64first strand
Strand 2
B
50 58anti-parallel
Strand 3
B
41 47anti-parallel
Strand 4
B
28 33anti-parallel
Strand 5
B
100 101parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
113 115first strand
Strand 2
B
135 139parallel
Strand 3
B
147 152anti-parallel
Strand 4
B
167 175anti-parallel
Strand 5
B
178 180anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
202 203first strand
Strand 2
B
209 210anti-parallel
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