Analysis of interatomic Contacts of Structural Units in PDB entry:
5X9H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5X9H entry

There are 2 chains in PDB entry 5X9H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 23ALA 449
B
 GLU 23GLU 448
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 5X9H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 36Right-handed alpha
Helix 2
AA2
A
37 40Right-handed 310
Helix 3
AA3
A
41 52Right-handed alpha
Helix 4
AA4
A
53 63Right-handed alpha
Helix 5
AA5
A
65 76Right-handed alpha
Helix 6
AA6
A
77 87Right-handed alpha
Helix 7
AA7
A
89 104Right-handed alpha
Helix 8
AA8
A
104 113Right-handed alpha
Helix 9
AA9
A
116 128Right-handed alpha
Helix 10
AB1
A
133 138Right-handed alpha
Helix 11
AB2
A
150 162Right-handed alpha
Helix 12
AB3
A
186 192Right-handed alpha
Helix 13
AB4
A
214 226Right-handed alpha
Helix 14
AB5
A
245 264Right-handed alpha
Helix 15
AB6
A
277 306Right-handed alpha
Helix 16
AB7
A
306 313Right-handed alpha
Helix 17
AB8
A
314 318Right-handed 310
Helix 18
AB9
A
319 344Right-handed alpha
Helix 19
AC1
A
348 350Right-handed 310
Helix 20
AC2
A
351 382Right-handed alpha
Helix 21
AC3
A
386 416Right-handed alpha
Helix 22
AC4
A
418 422Right-handed 310
Helix 23
AC5
A
423 449Right-handed alpha
Helix 24
AC6
B
23 27Right-handed 310
Helix 25
AC7
B
29 36Right-handed alpha
Helix 26
AC8
B
41 52Right-handed alpha
Helix 27
AC9
B
53 63Right-handed alpha
Helix 28
AD1
B
65 76Right-handed alpha
Helix 29
AD2
B
77 87Right-handed alpha
Helix 30
AD3
B
89 104Right-handed alpha
Helix 31
AD4
B
104 112Right-handed alpha
Helix 32
AD5
B
113 115Right-handed 310
Helix 33
AD6
B
116 128Right-handed alpha
Helix 34
AD7
B
133 137Right-handed 310
Helix 35
AD8
B
150 162Right-handed alpha
Helix 36
AD9
B
163 165Right-handed 310
Helix 37
AE1
B
186 192Right-handed alpha
Helix 38
AE2
B
197 202Right-handed alpha
Helix 39
AE3
B
214 225Right-handed alpha
Helix 40
AE4
B
245 264Right-handed alpha
Helix 41
AE5
B
272 276Right-handed 310
Helix 42
AE6
B
277 305Right-handed alpha
Helix 43
AE7
B
306 313Right-handed alpha
Helix 44
AE8
B
313 319Right-handed alpha
Helix 45
AE9
B
319 344Right-handed alpha
Helix 46
AF1
B
348 350Right-handed 310
Helix 47
AF2
B
351 381Right-handed alpha
Helix 48
AF3
B
387 414Right-handed alpha
Helix 49
AF4
B
418 422Right-handed 310
Helix 50
AF5
B
423 448Right-handed alpha
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There are 4 sheets in PDB entry 5X9H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 146first strand
Strand 2
A
170 174parallel
Strand 3
A
180 185anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 230first strand
Strand 2
A
243 244anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 144first strand
Strand 2
B
167 174parallel
Strand 3
B
180 185anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
209 210first strand
Strand 2
B
229 233parallel
Strand 3
B
239 244anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il