Analysis of interatomic Contacts of Structural Units in PDB entry:
5X9Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5X9Z entry

There are 2 chains in PDB entry 5X9Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 7	PHE 2217
B	SER 7	PHE 2217

There are176 helices in PDB entry 5X9Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	21	24	Right-handed 310
Helix 2	AA2	A	53	57	Right-handed 310
Helix 3	AA3	A	67	75	Right-handed alpha
Helix 4	AA4	A	86	110	Right-handed alpha
Helix 5	AA5	A	255	259	Right-handed 310
Helix 6	AA6	A	277	279	Right-handed 310
Helix 7	AA7	A	436	463	Right-handed alpha
Helix 8	AA8	A	466	485	Right-handed alpha
Helix 9	AA9	A	503	513	Right-handed alpha
Helix 10	AB1	A	515	522	Right-handed alpha
Helix 11	AB2	A	553	564	Right-handed alpha
Helix 12	AB3	A	568	572	Right-handed 310
Helix 13	AB4	A	573	578	Right-handed alpha
Helix 14	AB5	A	579	588	Right-handed alpha
Helix 15	AB6	A	591	602	Right-handed alpha
Helix 16	AB7	A	604	610	Right-handed alpha
Helix 17	AB8	A	613	625	Right-handed alpha
Helix 18	AB9	A	628	638	Right-handed alpha
Helix 19	AC1	A	640	642	Right-handed 310
Helix 20	AC2	A	643	658	Right-handed alpha
Helix 21	AC3	A	668	680	Right-handed alpha
Helix 22	AC4	A	684	703	Right-handed alpha
Helix 23	AC5	A	708	714	Right-handed alpha
Helix 24	AC6	A	725	737	Right-handed alpha
Helix 25	AC7	A	750	760	Right-handed alpha
Helix 26	AC8	A	760	771	Right-handed alpha
Helix 27	AC9	A	775	790	Right-handed alpha
Helix 28	AD1	A	826	849	Right-handed alpha
Helix 29	AD2	A	854	877	Right-handed alpha
Helix 30	AD3	A	881	898	Right-handed alpha
Helix 31	AD4	A	962	976	Right-handed alpha
Helix 32	AD5	A	976	986	Right-handed alpha
Helix 33	AD6	A	990	997	Right-handed alpha
Helix 34	AD7	A	1028	1033	Right-handed alpha
Helix 35	AD8	A	1036	1044	Right-handed alpha
Helix 36	AD9	A	1049	1055	Right-handed alpha
Helix 37	AE1	A	1060	1067	Right-handed alpha
Helix 38	AE2	A	1076	1085	Right-handed alpha
Helix 39	AE3	A	1086	1088	Right-handed 310
Helix 40	AE4	A	1094	1104	Right-handed alpha
Helix 41	AE5	A	1107	1116	Right-handed alpha
Helix 42	AE6	A	1118	1129	Right-handed alpha
Helix 43	AE7	A	1177	1192	Right-handed alpha
Helix 44	AE8	A	1194	1201	Right-handed alpha
Helix 45	AE9	A	1211	1219	Right-handed alpha
Helix 46	AF1	A	1229	1234	Right-handed alpha
Helix 47	AF2	A	1235	1239	Right-handed 310
Helix 48	AF3	A	1250	1255	Right-handed alpha
Helix 49	AF4	A	1271	1284	Right-handed alpha
Helix 50	AF5	A	1290	1298	Right-handed alpha
Helix 51	AF6	A	1303	1308	Right-handed alpha
Helix 52	AF7	A	1311	1318	Right-handed alpha
Helix 53	AF8	A	1322	1336	Right-handed alpha
Helix 54	AF9	A	1341	1347	Right-handed alpha
Helix 55	AG1	A	1357	1363	Right-handed alpha
Helix 56	AG2	A	1384	1388	Right-handed 310
Helix 57	AG3	A	1400	1412	Right-handed alpha
Helix 58	AG4	A	1416	1435	Right-handed alpha
Helix 59	AG5	A	1435	1442	Right-handed alpha
Helix 60	AG6	A	1445	1456	Right-handed alpha
Helix 61	AG7	A	1470	1481	Right-handed alpha
Helix 62	AG8	A	1481	1489	Right-handed alpha
Helix 63	AG9	A	1594	1615	Right-handed alpha
Helix 64	AH1	A	1616	1628	Right-handed alpha
Helix 65	AH2	A	1648	1661	Right-handed alpha
Helix 66	AH3	A	1666	1679	Right-handed alpha
Helix 67	AH4	A	1680	1684	Right-handed 310
Helix 68	AH5	A	1790	1800	Right-handed alpha
Helix 69	AH6	A	1803	1810	Right-handed alpha
Helix 70	AH7	A	1811	1815	Right-handed 310
Helix 71	AH8	A	1820	1833	Right-handed alpha
Helix 72	AH9	A	1835	1849	Right-handed alpha
Helix 73	AI1	A	1849	1855	Right-handed alpha
Helix 74	AI2	A	1857	1881	Right-handed alpha
Helix 75	AI3	A	1957	1983	Right-handed alpha
Helix 76	AI4	A	1985	1991	Right-handed alpha
Helix 77	AI5	A	1999	2011	Right-handed alpha
Helix 78	AI6	A	2020	2025	Right-handed alpha
Helix 79	AI7	A	2026	2044	Right-handed alpha
Helix 80	AI8	A	2047	2059	Right-handed alpha
Helix 81	AI9	A	2060	2070	Right-handed alpha
Helix 82	AJ1	A	2077	2100	Right-handed alpha
Helix 83	AJ2	A	2104	2112	Right-handed alpha
Helix 84	AJ3	A	2115	2133	Right-handed alpha
Helix 85	AJ4	A	2145	2150	Right-handed alpha
Helix 86	AJ5	A	2150	2161	Right-handed alpha
Helix 87	AJ6	A	2162	2164	Right-handed 310
Helix 88	AJ7	A	2166	2177	Right-handed alpha
Helix 89	AJ8	A	2181	2191	Right-handed alpha
Helix 90	AJ9	B	52	57	Right-handed 310
Helix 91	AK1	B	68	75	Right-handed alpha
Helix 92	AK2	B	86	106	Right-handed alpha
Helix 93	AK3	B	107	110	Right-handed 310
Helix 94	AK4	B	156	160	Right-handed 310
Helix 95	AK5	B	436	463	Right-handed alpha
Helix 96	AK6	B	466	483	Right-handed alpha
Helix 97	AK7	B	504	513	Right-handed alpha
Helix 98	AK8	B	514	524	Right-handed alpha
Helix 99	AK9	B	553	564	Right-handed alpha
Helix 100	AL1	B	570	573	Right-handed 310
Helix 101	AL2	B	574	585	Right-handed alpha
Helix 102	AL3	B	591	602	Right-handed alpha
Helix 103	AL4	B	603	611	Right-handed alpha
Helix 104	AL5	B	612	625	Right-handed alpha
Helix 105	AL6	B	628	637	Right-handed alpha
Helix 106	AL7	B	643	658	Right-handed alpha
Helix 107	AL8	B	670	680	Right-handed alpha
Helix 108	AL9	B	684	702	Right-handed alpha
Helix 109	AM1	B	708	714	Right-handed alpha
Helix 110	AM2	B	726	738	Right-handed alpha
Helix 111	AM3	B	750	760	Right-handed alpha
Helix 112	AM4	B	760	770	Right-handed alpha
Helix 113	AM5	B	776	790	Right-handed alpha
Helix 114	AM6	B	828	847	Right-handed alpha
Helix 115	AM7	B	855	877	Right-handed alpha
Helix 116	AM8	B	882	899	Right-handed alpha
Helix 117	AM9	B	962	968	Right-handed alpha
Helix 118	AN1	B	971	986	Right-handed alpha
Helix 119	AN2	B	1028	1045	Right-handed alpha
Helix 120	AN3	B	1050	1055	Right-handed alpha
Helix 121	AN4	B	1060	1068	Right-handed alpha
Helix 122	AN5	B	1073	1077	Right-handed 310
Helix 123	AN6	B	1078	1087	Right-handed alpha
Helix 124	AN7	B	1093	1104	Right-handed alpha
Helix 125	AN8	B	1107	1116	Right-handed alpha
Helix 126	AN9	B	1118	1132	Right-handed alpha
Helix 127	AO1	B	1177	1192	Right-handed alpha
Helix 128	AO2	B	1194	1201	Right-handed alpha
Helix 129	AO3	B	1202	1204	Right-handed 310
Helix 130	AO4	B	1206	1219	Right-handed alpha
Helix 131	AO5	B	1228	1238	Right-handed alpha
Helix 132	AO6	B	1250	1256	Right-handed alpha
Helix 133	AO7	B	1272	1284	Right-handed alpha
Helix 134	AO8	B	1290	1298	Right-handed alpha
Helix 135	AO9	B	1301	1310	Right-handed 310
Helix 136	AP1	B	1311	1320	Right-handed alpha
Helix 137	AP2	B	1322	1336	Right-handed alpha
Helix 138	AP3	B	1337	1340	Right-handed 310
Helix 139	AP4	B	1349	1354	Right-handed alpha
Helix 140	AP5	B	1356	1365	Right-handed alpha
Helix 141	AP6	B	1371	1388	Right-handed alpha
Helix 142	AP7	B	1403	1410	Right-handed alpha
Helix 143	AP8	B	1419	1431	Right-handed alpha
Helix 144	AP9	B	1432	1434	Right-handed 310
Helix 145	AQ1	B	1435	1440	Right-handed 310
Helix 146	AQ2	B	1447	1458	Right-handed alpha
Helix 147	AQ3	B	1459	1462	Right-handed 310
Helix 148	AQ4	B	1472	1491	Right-handed alpha
Helix 149	AQ5	B	1596	1615	Right-handed alpha
Helix 150	AQ6	B	1616	1628	Right-handed alpha
Helix 151	AQ7	B	1630	1636	Right-handed alpha
Helix 152	AQ8	B	1640	1644	Right-handed 310
Helix 153	AQ9	B	1649	1661	Right-handed alpha
Helix 154	AR1	B	1668	1679	Right-handed alpha
Helix 155	AR2	B	1680	1684	Right-handed 310
Helix 156	AR3	B	1790	1801	Right-handed alpha
Helix 157	AR4	B	1803	1814	Right-handed alpha
Helix 158	AR5	B	1822	1833	Right-handed alpha
Helix 159	AR6	B	1835	1849	Right-handed alpha
Helix 160	AR7	B	1849	1854	Right-handed alpha
Helix 161	AR8	B	1855	1881	Right-handed alpha
Helix 162	AR9	B	1957	1966	Right-handed alpha
Helix 163	AS1	B	1967	1983	Right-handed alpha
Helix 164	AS2	B	1985	1990	Right-handed alpha
Helix 165	AS3	B	2000	2010	Right-handed alpha
Helix 166	AS4	B	2019	2024	Right-handed alpha
Helix 167	AS5	B	2025	2043	Right-handed alpha
Helix 168	AS6	B	2047	2059	Right-handed alpha
Helix 169	AS7	B	2060	2069	Right-handed alpha
Helix 170	AS8	B	2077	2099	Right-handed alpha
Helix 171	AS9	B	2103	2113	Right-handed alpha
Helix 172	AT1	B	2118	2135	Right-handed alpha
Helix 173	AT2	B	2146	2151	Right-handed alpha
Helix 174	AT3	B	2154	2162	Right-handed alpha
Helix 175	AT4	B	2165	2177	Right-handed alpha
Helix 176	AT5	B	2186	2193	Right-handed alpha

There are 17 sheets in PDB entry 5X9Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	25	26	first strand
Strand 2	A	14	20	anti-parallel
Strand 3	A	58	60	anti-parallel
Strand 4	A	123	125	anti-parallel
Strand 5	A	130	139	anti-parallel
Strand 6	A	147	151	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	25	26	first strand
Strand 2	A	14	20	anti-parallel
Strand 3	A	217	222	anti-parallel
Strand 4	A	181	182	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	38	39	first strand
Strand 2	A	207	208	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	241	first strand
Strand 2	A	281	286	anti-parallel
Strand 3	A	303	306	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	243	244	first strand
Strand 2	A	249	250	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	368	369	first strand
Strand 2	A	391	392	anti-parallel
Strand 3	A	397	398	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	387	389	first strand
Strand 2	A	429	431	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	400	401	first strand
Strand 2	A	418	419	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	14	15	first strand
Strand 2	B	58	59	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	19	20	first strand
Strand 2	B	217	219	anti-parallel
Strand 3	B	181	183	anti-parallel
Strand 4	B	164	165	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	115	116	first strand
Strand 2	B	175	176	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	133	140	first strand
Strand 2	B	146	150	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	193	194	first strand
Strand 2	B	210	211	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	199	200	first strand
Strand 2	B	203	207	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	250	251	first strand
Strand 2	B	242	243	anti-parallel
Strand 3	B	430	432	anti-parallel
Strand 4	B	387	391	anti-parallel
Strand 5	B	368	371	anti-parallel
Strand 6	B	302	303	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	282	283	first strand
Strand 2	B	305	307	anti-parallel
Strand 3	B	313	314	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	400	402	first strand
Strand 2	B	417	419	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5X9Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
5X9Z