Analysis of interatomic Contacts of Structural Units in PDB entry:
5XA8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XA8 entry

There is 1 chain in PDB entry 5XA8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 994
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 5XA8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 16Right-handed alpha
Helix 2
AA2
A
25 36Right-handed alpha
Helix 3
AA3
A
48 55Right-handed alpha
Helix 4
AA4
A
59 75Right-handed alpha
Helix 5
AA5
A
76 79Right-handed 310
Helix 6
AA6
A
80 82Right-handed 310
Helix 7
AA7
A
83 121Right-handed alpha
Helix 8
AA8
A
143 145Right-handed 310
Helix 9
AA9
A
200 204Right-handed 310
Helix 10
AB1
A
226 230Right-handed 310
Helix 11
AB2
A
247 274Right-handed alpha
Helix 12
AB3
A
275 279Right-handed 310
Helix 13
AB4
A
290 307Right-handed alpha
Helix 14
AB5
A
310 329Right-handed alpha
Helix 15
AB6
A
337 345Right-handed alpha
Helix 16
AB7
A
403 406Right-handed 310
Helix 17
AB8
A
407 420Right-handed alpha
Helix 18
AB9
A
439 452Right-handed alpha
Helix 19
AC1
A
469 477Right-handed alpha
Helix 20
AC2
A
504 508Right-handed 310
Helix 21
AC3
A
517 524Right-handed alpha
Helix 22
AC4
A
538 555Right-handed alpha
Helix 23
AC5
A
572 576Right-handed 310
Helix 24
AC6
A
580 582Right-handed 310
Helix 25
AC7
A
583 588Right-handed alpha
Helix 26
AC8
A
605 617Right-handed alpha
Helix 27
AC9
A
628 639Right-handed alpha
Helix 28
AD1
A
655 661Right-handed alpha
Helix 29
AD2
A
662 671Right-handed alpha
Helix 30
AD3
A
680 693Right-handed alpha
Helix 31
AD4
A
707 714Right-handed alpha
Helix 32
AD5
A
724 730Right-handed alpha
Helix 33
AD6
A
740 782Right-handed alpha
Helix 34
AD7
A
788 800Right-handed alpha
Helix 35
AD8
A
801 806Right-handed alpha
Helix 36
AD9
A
807 810Right-handed 310
Helix 37
AE1
A
830 857Right-handed alpha
Helix 38
AE2
A
889 892Right-handed 310
Helix 39
AE3
A
893 912Right-handed alpha
Helix 40
AE4
A
913 917Right-handed 310
Helix 41
AE5
A
926 929Right-handed 310
Helix 42
AE6
A
930 950Right-handed alpha
Helix 43
AE7
A
952 957Right-handed alpha
Helix 44
AE8
A
963 975Right-handed alpha
Helix 45
AE9
A
976 990Right-handed alpha
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There are 6 sheets in PDB entry 5XA8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 141first strand
Strand 2
A
126 130anti-parallel
Strand 3
A
150 153anti-parallel
Strand 4
A
219 225anti-parallel
Strand 5
A
162 168anti-parallel
Strand 6
A
207 208anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 188first strand
Strand 2
A
174 176anti-parallel
Strand 3
A
213 216anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
331 333first strand
Strand 2
A
733 735anti-parallel
Strand 3
A
716 720parallel
Strand 4
A
698 702parallel
Strand 5
A
347 350parallel
Strand 6
A
620 624parallel
Strand 7
A
675 677parallel
Strand 8
A
652 654parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
395 396first strand
Strand 2
A
377 384anti-parallel
Strand 3
A
362 372anti-parallel
Strand 4
A
591 600anti-parallel
Strand 5
A
560 567anti-parallel
Strand 6
A
511 516anti-parallel
Strand 7
A
493 500anti-parallel
Strand 8
A
479 488anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
395 396first strand
Strand 2
A
377 384anti-parallel
Strand 3
A
362 372anti-parallel
Strand 4
A
591 600anti-parallel
Strand 5
A
525 530parallel
Strand 6
A
533 536anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
424 428first strand
Strand 2
A
433 437anti-parallel
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