Analysis of interatomic Contacts of Structural Units in PDB entry:
5XB7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XB7 entry

There are 6 chains in PDB entry 5XB7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 8THR 699
B
PRO 8GLY 695
C
PRO 8ARG 696
D
PRO 8PRO 698
E
PRO 8PRO 698
F
PRO 8LEU 705
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are160 helices in PDB entry 5XB7. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
16 20Right-handed 310
Helix 2
AA2
A
26 37Right-handed alpha
Helix 3
AA3
A
48 53Right-handed alpha
Helix 4
AA4
A
61 75Right-handed alpha
Helix 5
AA5
A
88 95Right-handed alpha
Helix 6
AA6
A
96 99Right-handed 310
Helix 7
AA7
A
119 138Right-handed alpha
Helix 8
AA8
A
159 174Right-handed alpha
Helix 9
AA9
A
177 185Right-handed alpha
Helix 10
AB1
A
188 192Right-handed 310
Helix 11
AB2
A
196 200Right-handed 310
Helix 12
AB3
A
208 236Right-handed alpha
Helix 13
AB4
A
264 269Right-handed alpha
Helix 14
AB5
A
270 272Right-handed 310
Helix 15
AB6
A
283 287Right-handed 310
Helix 16
AB7
A
289 304Right-handed alpha
Helix 17
AB8
A
325 337Right-handed alpha
Helix 18
AB9
A
369 384Right-handed alpha
Helix 19
AC1
A
384 392Right-handed alpha
Helix 20
AC2
A
405 415Right-handed alpha
Helix 21
AC3
A
428 443Right-handed alpha
Helix 22
AC4
A
455 461Right-handed alpha
Helix 23
AC5
A
474 487Right-handed alpha
Helix 24
AC6
A
515 520Right-handed alpha
Helix 25
AC7
A
540 544Right-handed 310
Helix 26
AC8
A
596 612Right-handed alpha
Helix 27
AC9
A
617 621Right-handed 310
Helix 28
AD1
B
16 20Right-handed 310
Helix 29
AD2
B
26 37Right-handed alpha
Helix 30
AD3
B
48 53Right-handed alpha
Helix 31
AD4
B
61 75Right-handed alpha
Helix 32
AD5
B
88 95Right-handed alpha
Helix 33
AD6
B
96 99Right-handed 310
Helix 34
AD7
B
119 138Right-handed alpha
Helix 35
AD8
B
159 174Right-handed alpha
Helix 36
AD9
B
177 185Right-handed alpha
Helix 37
AE1
B
188 192Right-handed 310
Helix 38
AE2
B
196 200Right-handed 310
Helix 39
AE3
B
208 236Right-handed alpha
Helix 40
AE4
B
264 269Right-handed alpha
Helix 41
AE5
B
270 272Right-handed 310
Helix 42
AE6
B
283 287Right-handed 310
Helix 43
AE7
B
289 303Right-handed alpha
Helix 44
AE8
B
325 337Right-handed alpha
Helix 45
AE9
B
369 384Right-handed alpha
Helix 46
AF1
B
384 392Right-handed alpha
Helix 47
AF2
B
405 415Right-handed alpha
Helix 48
AF3
B
428 443Right-handed alpha
Helix 49
AF4
B
455 461Right-handed alpha
Helix 50
AF5
B
474 487Right-handed alpha
Helix 51
AF6
B
515 520Right-handed alpha
Helix 52
AF7
B
540 544Right-handed 310
Helix 53
AF8
B
596 611Right-handed alpha
Helix 54
AF9
B
615 621Right-handed 310
Helix 55
AG1
C
16 20Right-handed 310
Helix 56
AG2
C
26 37Right-handed alpha
Helix 57
AG3
C
48 53Right-handed alpha
Helix 58
AG4
C
61 75Right-handed alpha
Helix 59
AG5
C
88 95Right-handed alpha
Helix 60
AG6
C
96 99Right-handed 310
Helix 61
AG7
C
119 138Right-handed alpha
Helix 62
AG8
C
159 174Right-handed alpha
Helix 63
AG9
C
177 186Right-handed alpha
Helix 64
AH1
C
188 192Right-handed 310
Helix 65
AH2
C
196 200Right-handed 310
Helix 66
AH3
C
208 236Right-handed alpha
Helix 67
AH4
C
264 269Right-handed alpha
Helix 68
AH5
C
270 272Right-handed 310
Helix 69
AH6
C
283 287Right-handed 310
Helix 70
AH7
C
289 303Right-handed alpha
Helix 71
AH8
C
325 337Right-handed alpha
Helix 72
AH9
C
369 384Right-handed alpha
Helix 73
AI1
C
384 392Right-handed alpha
Helix 74
AI2
C
405 415Right-handed alpha
Helix 75
AI3
C
428 443Right-handed alpha
Helix 76
AI4
C
455 461Right-handed alpha
Helix 77
AI5
C
474 487Right-handed alpha
Helix 78
AI6
C
515 520Right-handed alpha
Helix 79
AI7
C
540 544Right-handed 310
Helix 80
AI8
C
596 611Right-handed alpha
Helix 81
AI9
C
615 621Right-handed 310
Helix 82
AJ1
D
16 20Right-handed 310
Helix 83
AJ2
D
26 37Right-handed alpha
Helix 84
AJ3
D
48 53Right-handed alpha
Helix 85
AJ4
D
61 75Right-handed alpha
Helix 86
AJ5
D
88 95Right-handed alpha
Helix 87
AJ6
D
96 99Right-handed 310
Helix 88
AJ7
D
119 138Right-handed alpha
Helix 89
AJ8
D
159 174Right-handed alpha
Helix 90
AJ9
D
177 186Right-handed alpha
Helix 91
AK1
D
188 192Right-handed 310
Helix 92
AK2
D
196 200Right-handed 310
Helix 93
AK3
D
208 236Right-handed alpha
Helix 94
AK4
D
264 269Right-handed alpha
Helix 95
AK5
D
270 272Right-handed 310
Helix 96
AK6
D
283 287Right-handed 310
Helix 97
AK7
D
289 304Right-handed alpha
Helix 98
AK8
D
325 337Right-handed alpha
Helix 99
AK9
D
369 384Right-handed alpha
Helix 100
AL1
D
384 392Right-handed alpha
Helix 101
AL2
D
405 415Right-handed alpha
Helix 102
AL3
D
428 443Right-handed alpha
Helix 103
AL4
D
455 461Right-handed alpha
Helix 104
AL5
D
474 487Right-handed alpha
Helix 105
AL6
D
515 520Right-handed alpha
Helix 106
AL7
D
540 544Right-handed 310
Helix 107
AL8
D
596 611Right-handed alpha
Helix 108
AL9
D
616 621Right-handed 310
Helix 109
AM1
E
26 37Right-handed alpha
Helix 110
AM2
E
48 53Right-handed alpha
Helix 111
AM3
E
61 75Right-handed alpha
Helix 112
AM4
E
88 95Right-handed alpha
Helix 113
AM5
E
96 99Right-handed 310
Helix 114
AM6
E
119 138Right-handed alpha
Helix 115
AM7
E
159 174Right-handed alpha
Helix 116
AM8
E
177 185Right-handed alpha
Helix 117
AM9
E
188 192Right-handed 310
Helix 118
AN1
E
196 200Right-handed 310
Helix 119
AN2
E
208 236Right-handed alpha
Helix 120
AN3
E
264 269Right-handed alpha
Helix 121
AN4
E
270 272Right-handed 310
Helix 122
AN5
E
283 287Right-handed 310
Helix 123
AN6
E
289 303Right-handed alpha
Helix 124
AN7
E
325 337Right-handed alpha
Helix 125
AN8
E
369 384Right-handed alpha
Helix 126
AN9
E
384 392Right-handed alpha
Helix 127
AO1
E
405 415Right-handed alpha
Helix 128
AO2
E
428 443Right-handed alpha
Helix 129
AO3
E
455 461Right-handed alpha
Helix 130
AO4
E
474 487Right-handed alpha
Helix 131
AO5
E
515 520Right-handed alpha
Helix 132
AO6
E
540 544Right-handed 310
Helix 133
AO7
E
596 611Right-handed alpha
Helix 134
AO8
E
616 621Right-handed 310
Helix 135
AO9
F
26 37Right-handed alpha
Helix 136
AP1
F
48 53Right-handed alpha
Helix 137
AP2
F
61 75Right-handed alpha
Helix 138
AP3
F
88 95Right-handed alpha
Helix 139
AP4
F
96 99Right-handed 310
Helix 140
AP5
F
119 138Right-handed alpha
Helix 141
AP6
F
159 174Right-handed alpha
Helix 142
AP7
F
177 185Right-handed alpha
Helix 143
AP8
F
188 192Right-handed 310
Helix 144
AP9
F
196 200Right-handed 310
Helix 145
AQ1
F
208 236Right-handed alpha
Helix 146
AQ2
F
264 269Right-handed alpha
Helix 147
AQ3
F
270 272Right-handed 310
Helix 148
AQ4
F
283 287Right-handed 310
Helix 149
AQ5
F
289 304Right-handed alpha
Helix 150
AQ6
F
325 337Right-handed alpha
Helix 151
AQ7
F
369 384Right-handed alpha
Helix 152
AQ8
F
384 392Right-handed alpha
Helix 153
AQ9
F
405 415Right-handed alpha
Helix 154
AR1
F
428 443Right-handed alpha
Helix 155
AR2
F
455 461Right-handed alpha
Helix 156
AR3
F
474 487Right-handed alpha
Helix 157
AR4
F
515 520Right-handed alpha
Helix 158
AR5
F
540 544Right-handed 310
Helix 159
AR6
F
596 612Right-handed alpha
Helix 160
AR7
F
616 621Right-handed 310
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There are 40 sheets in PDB entry 5XB7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
243 245first strand
Strand 2
A
143 147parallel
Strand 3
A
77 81parallel
Strand 4
A
41 44parallel
Strand 5
A
10 14parallel
Strand 6
A
339 344parallel
Strand 7
A
307 312parallel
Strand 8
A
276 279parallel
Strand 9
A
247 248parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
447 451first strand
Strand 2
A
400 404parallel
Strand 3
A
464 467parallel
Strand 4
A
490 494parallel
Strand 5
A
586 591parallel
Strand 6
A
576 583anti-parallel
Strand 7
A
562 568anti-parallel
Strand 8
A
533 535anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
521 522first strand
Strand 2
A
556 557anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
526 527first strand
Strand 2
A
549 553anti-parallel
Strand 3
A
593 594anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
625 630first strand
Strand 2
A
636 641anti-parallel
Strand 3
A
690 694anti-parallel
Strand 4
A
656 658anti-parallel
Strand 5
A
676 677anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
648 651first strand
Strand 2
A
682 685anti-parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
243 245first strand
Strand 2
B
143 147parallel
Strand 3
B
77 81parallel
Strand 4
B
41 44parallel
Strand 5
B
10 14parallel
Strand 6
B
339 345parallel
Strand 7
B
307 313parallel
Strand 8
B
276 279parallel
Strand 9
B
247 248parallel
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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
447 451first strand
Strand 2
B
400 404parallel
Strand 3
B
464 467parallel
Strand 4
B
490 494parallel
Strand 5
B
586 591parallel
Strand 6
B
576 583anti-parallel
Strand 7
B
562 568anti-parallel
Strand 8
B
533 535anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
521 522first strand
Strand 2
B
556 557anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
526 527first strand
Strand 2
B
549 553anti-parallel
Strand 3
B
593 594anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
625 630first strand
Strand 2
B
636 641anti-parallel
Strand 3
B
690 695anti-parallel
Strand 4
B
656 658anti-parallel
Strand 5
B
676 677anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
648 651first strand
Strand 2
B
682 685anti-parallel
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There are 9 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
243 245first strand
Strand 2
C
143 147parallel
Strand 3
C
77 81parallel
Strand 4
C
41 44parallel
Strand 5
C
10 14parallel
Strand 6
C
339 344parallel
Strand 7
C
307 312parallel
Strand 8
C
276 279parallel
Strand 9
C
247 248parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
251 252first strand
Strand 2
C
256 258anti-parallel
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There are 8 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
447 451first strand
Strand 2
C
400 404parallel
Strand 3
C
464 467parallel
Strand 4
C
490 494parallel
Strand 5
C
586 591parallel
Strand 6
C
576 583anti-parallel
Strand 7
C
562 568anti-parallel
Strand 8
C
533 535anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
521 522first strand
Strand 2
C
556 557anti-parallel
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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
526 527first strand
Strand 2
C
549 553anti-parallel
Strand 3
C
593 594anti-parallel
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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
625 630first strand
Strand 2
C
636 641anti-parallel
Strand 3
C
690 694anti-parallel
Strand 4
C
656 658anti-parallel
Strand 5
C
676 677anti-parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
648 651first strand
Strand 2
C
682 685anti-parallel
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There are 9 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
243 245first strand
Strand 2
D
143 147parallel
Strand 3
D
77 81parallel
Strand 4
D
41 44parallel
Strand 5
D
10 14parallel
Strand 6
D
339 344parallel
Strand 7
D
307 312parallel
Strand 8
D
276 279parallel
Strand 9
D
247 248parallel
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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
251 252first strand
Strand 2
D
256 258anti-parallel
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There are 8 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
447 451first strand
Strand 2
D
400 404parallel
Strand 3
D
464 467parallel
Strand 4
D
490 494parallel
Strand 5
D
586 591parallel
Strand 6
D
576 583anti-parallel
Strand 7
D
562 568anti-parallel
Strand 8
D
533 535anti-parallel
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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
521 522first strand
Strand 2
D
556 557anti-parallel
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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
526 527first strand
Strand 2
D
549 553anti-parallel
Strand 3
D
593 594anti-parallel
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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
625 630first strand
Strand 2
D
636 641anti-parallel
Strand 3
D
690 694anti-parallel
Strand 4
D
656 658anti-parallel
Strand 5
D
676 677anti-parallel
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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
648 651first strand
Strand 2
D
682 685anti-parallel
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There are 9 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
243 245first strand
Strand 2
E
143 147parallel
Strand 3
E
77 81parallel
Strand 4
E
41 44parallel
Strand 5
E
10 14parallel
Strand 6
E
339 344parallel
Strand 7
E
307 312parallel
Strand 8
E
276 279parallel
Strand 9
E
247 248parallel
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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
251 252first strand
Strand 2
E
256 258anti-parallel
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There are 8 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
447 451first strand
Strand 2
E
400 404parallel
Strand 3
E
464 467parallel
Strand 4
E
490 494parallel
Strand 5
E
586 591parallel
Strand 6
E
576 583anti-parallel
Strand 7
E
562 568anti-parallel
Strand 8
E
533 535anti-parallel
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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
521 522first strand
Strand 2
E
556 557anti-parallel
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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
526 527first strand
Strand 2
E
549 553anti-parallel
Strand 3
E
593 594anti-parallel
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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
625 630first strand
Strand 2
E
636 641anti-parallel
Strand 3
E
690 694anti-parallel
Strand 4
E
656 658anti-parallel
Strand 5
E
676 677anti-parallel
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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
648 651first strand
Strand 2
E
682 685anti-parallel
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There are 9 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
243 245first strand
Strand 2
F
143 147parallel
Strand 3
F
77 81parallel
Strand 4
F
41 44parallel
Strand 5
F
10 14parallel
Strand 6
F
339 344parallel
Strand 7
F
307 312parallel
Strand 8
F
276 279parallel
Strand 9
F
247 248parallel
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There are 8 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
447 451first strand
Strand 2
F
400 404parallel
Strand 3
F
464 467parallel
Strand 4
F
490 494parallel
Strand 5
F
586 591parallel
Strand 6
F
576 583anti-parallel
Strand 7
F
562 568anti-parallel
Strand 8
F
533 535anti-parallel
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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
521 522first strand
Strand 2
F
556 557anti-parallel
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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
526 527first strand
Strand 2
F
549 553anti-parallel
Strand 3
F
593 594anti-parallel
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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
625 630first strand
Strand 2
F
636 641anti-parallel
Strand 3
F
690 694anti-parallel
Strand 4
F
656 658anti-parallel
Strand 5
F
675 677anti-parallel
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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
648 651first strand
Strand 2
F
682 685anti-parallel
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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
662 663first strand
Strand 2
F
669 671anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il