Analysis of interatomic Contacts of Structural Units in PDB entry:
5XBI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XBI entry

There are 2 chains in PDB entry 5XBI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 122TYR 270
B
 ARG 123TYR 270
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 5XBI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
145 154Right-handed alpha
Helix 2
AA2
A
155 160Right-handed 310
Helix 3
AA3
A
220 231Right-handed alpha
Helix 4
AA4
A
231 237Right-handed alpha
Helix 5
AA5
B
145 154Right-handed alpha
Helix 6
AA6
B
155 160Right-handed 310
Helix 7
AA7
B
220 231Right-handed alpha
Helix 8
AA8
B
231 237Right-handed alpha
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There are 2 sheets in PDB entry 5XBI. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 127first strand
Strand 2
A
207 215anti-parallel
Strand 3
A
262 268anti-parallel
Strand 4
A
245 249anti-parallel
Strand 5
A
169 175anti-parallel
Strand 6
A
181 189anti-parallel
Strand 7
A
130 138anti-parallel
Strand 8
A
200 204anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 127first strand
Strand 2
B
207 215anti-parallel
Strand 3
B
262 269anti-parallel
Strand 4
B
245 249anti-parallel
Strand 5
B
169 175anti-parallel
Strand 6
B
181 189anti-parallel
Strand 7
B
130 138anti-parallel
Strand 8
B
200 204anti-parallel
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