Analysis of interatomic Contacts of Structural Units in PDB entry:
5XE0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XE0 entry

There is 1 chain in PDB entry 5XE0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1PHE 457
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5XE0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 56Right-handed alpha
Helix 2
AA2
A
67 82Right-handed alpha
Helix 3
AA3
A
83 85Right-handed 310
Helix 4
AA4
A
92 99Right-handed alpha
Helix 5
AA5
A
115 120Right-handed 310
Helix 6
AA6
A
122 127Right-handed alpha
Helix 7
AA7
A
134 145Right-handed alpha
Helix 8
AA8
A
160 166Right-handed alpha
Helix 9
AA9
A
176 197Right-handed alpha
Helix 10
AB1
A
209 221Right-handed alpha
Helix 11
AB2
A
232 237Right-handed alpha
Helix 12
AB3
A
238 252Right-handed alpha
Helix 13
AB4
A
255 257Right-handed 310
Helix 14
AB5
A
258 265Right-handed alpha
Helix 15
AB6
A
288 309Right-handed alpha
Helix 16
AB7
A
313 317Right-handed 310
Helix 17
AB8
A
335 346Right-handed alpha
Helix 18
AB9
A
354 356Right-handed 310
Helix 19
AC1
A
389 398Right-handed alpha
Helix 20
AC2
A
402 404Right-handed 310
Helix 21
AC3
A
405 418Right-handed alpha
Helix 22
AC4
A
421 433Right-handed alpha
Helix 23
AC5
A
435 440Right-handed alpha
Helix 24
AC6
A
445 456Right-handed alpha
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There are 5 sheets in PDB entry 5XE0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 8first strand
Strand 2
A
274 279anti-parallel
Strand 3
A
266 271anti-parallel
Strand 4
A
150 154parallel
Strand 5
A
171 174anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 23first strand
Strand 2
A
399 400anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 36first strand
Strand 2
A
158 159anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
318 322first strand
Strand 2
A
325 330anti-parallel
Strand 3
A
224 230anti-parallel
Strand 4
A
350 352anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
368 369first strand
Strand 2
A
372 376anti-parallel
Strand 3
A
384 387anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il