Analysis of interatomic Contacts of Structural Units in PDB entry:
5XE5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XE5 entry

There are 2 chains in PDB entry 5XE5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 11PRO 290
B
 VAL 11PRO 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 5XE5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 33Right-handed alpha
Helix 2
AA2
A
37 41Right-handed 310
Helix 3
AA3
A
48 50Right-handed 310
Helix 4
AA4
A
51 57Right-handed alpha
Helix 5
AA5
A
60 64Right-handed 310
Helix 6
AA6
A
68 74Right-handed alpha
Helix 7
AA7
A
75 77Right-handed 310
Helix 8
AA8
A
107 118Right-handed alpha
Helix 9
AA9
A
121 129Right-handed alpha
Helix 10
AB1
A
141 146Right-handed alpha
Helix 11
AB2
A
151 155Right-handed 310
Helix 12
AB3
A
179 184Right-handed 310
Helix 13
AB4
A
186 193Right-handed 310
Helix 14
AB5
A
250 254Right-handed 310
Helix 15
AB6
A
258 289Right-handed alpha
Helix 16
AB7
B
18 32Right-handed alpha
Helix 17
AB8
B
35 41Right-handed 310
Helix 18
AB9
B
48 56Right-handed 310
Helix 19
AC1
B
60 64Right-handed 310
Helix 20
AC2
B
68 73Right-handed alpha
Helix 21
AC3
B
74 77Right-handed 310
Helix 22
AC4
B
107 118Right-handed alpha
Helix 23
AC5
B
121 129Right-handed alpha
Helix 24
AC6
B
140 145Right-handed 310
Helix 25
AC7
B
151 155Right-handed 310
Helix 26
AC8
B
179 184Right-handed 310
Helix 27
AC9
B
186 191Right-handed 310
Helix 28
AD1
B
250 254Right-handed 310
Helix 29
AD2
B
258 289Right-handed alpha
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There are 6 sheets in PDB entry 5XE5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 13first strand
Strand 2
A
46 47anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 89first strand
Strand 2
A
95 104anti-parallel
Strand 3
A
225 234anti-parallel
Strand 4
A
211 222anti-parallel
Strand 5
A
200 205anti-parallel
Strand 6
A
170 178anti-parallel
Strand 7
A
159 165anti-parallel
Strand 8
A
133 137anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 89first strand
Strand 2
A
95 104anti-parallel
Strand 3
A
225 234anti-parallel
Strand 4
A
211 222anti-parallel
Strand 5
A
195 198anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 13first strand
Strand 2
B
46 47anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 89first strand
Strand 2
B
95 104anti-parallel
Strand 3
B
225 234anti-parallel
Strand 4
B
211 222anti-parallel
Strand 5
B
201 205anti-parallel
Strand 6
B
170 177anti-parallel
Strand 7
B
159 165anti-parallel
Strand 8
B
133 137anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 89first strand
Strand 2
B
95 104anti-parallel
Strand 3
B
225 234anti-parallel
Strand 4
B
211 222anti-parallel
Strand 5
B
195 198anti-parallel
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