Analysis of interatomic Contacts of Structural Units in PDB entry:
5XEO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XEO entry

There are 2 chains in PDB entry 5XEO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -3LEU 300
B
 LEU 2LEU 300
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 5XEO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 10Right-handed 310
Helix 2
AA2
A
34 36Right-handed 310
Helix 3
AA3
A
41 56Right-handed alpha
Helix 4
AA4
A
71 85Right-handed alpha
Helix 5
AA5
A
97 107Right-handed alpha
Helix 6
AA6
A
120 134Right-handed alpha
Helix 7
AA7
A
146 155Right-handed alpha
Helix 8
AA8
A
155 164Right-handed alpha
Helix 9
AA9
A
178 192Right-handed alpha
Helix 10
AB1
A
206 211Right-handed alpha
Helix 11
AB2
A
233 237Right-handed 310
Helix 12
AB3
A
244 260Right-handed alpha
Helix 13
AB4
A
264 280Right-handed alpha
Helix 14
AB5
A
296 300Right-handed 310
Helix 15
AB6
B
5 10Right-handed 310
Helix 16
AB7
B
34 36Right-handed 310
Helix 17
AB8
B
41 56Right-handed alpha
Helix 18
AB9
B
71 85Right-handed alpha
Helix 19
AC1
B
97 107Right-handed alpha
Helix 20
AC2
B
115 117Right-handed 310
Helix 21
AC3
B
118 134Right-handed alpha
Helix 22
AC4
B
146 155Right-handed alpha
Helix 23
AC5
B
155 164Right-handed alpha
Helix 24
AC6
B
178 192Right-handed alpha
Helix 25
AC7
B
206 211Right-handed alpha
Helix 26
AC8
B
233 237Right-handed 310
Helix 27
AC9
B
244 260Right-handed alpha
Helix 28
AD1
B
264 281Right-handed alpha
Helix 29
AD2
B
296 300Right-handed 310
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There are 4 sheets in PDB entry 5XEO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
B
15 17parallel
Strand 3
B
27 32anti-parallel
Strand 4
B
287 292parallel
Strand 5
B
170 174parallel
Strand 6
B
196 202parallel
Strand 7
B
241 243parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 17first strand
Strand 2
A
27 32anti-parallel
Strand 3
A
287 292parallel
Strand 4
A
170 174parallel
Strand 5
A
196 202parallel
Strand 6
A
241 243parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 114first strand
Strand 2
A
88 93parallel
Strand 3
A
64 68parallel
Strand 4
A
137 138parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
110 114first strand
Strand 2
B
87 93parallel
Strand 3
B
64 68parallel
Strand 4
B
137 138parallel
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