Analysis of interatomic Contacts of Structural Units in PDB entry:
5XEY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5XEY entry

There are 4 chains in PDB entry 5XEY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 11	GLU 287
B	VAL 11	GLY 289
C	VAL 11	GLU 287
D	HIS 12	GLU 287

There are 59 helices in PDB entry 5XEY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	18	33	Right-handed alpha
Helix 2	AA2	A	37	41	Right-handed 310
Helix 3	AA3	A	48	50	Right-handed 310
Helix 4	AA4	A	51	57	Right-handed alpha
Helix 5	AA5	A	60	64	Right-handed 310
Helix 6	AA6	A	68	74	Right-handed alpha
Helix 7	AA7	A	75	77	Right-handed 310
Helix 8	AA8	A	107	118	Right-handed alpha
Helix 9	AA9	A	121	129	Right-handed alpha
Helix 10	AB1	A	140	145	Right-handed 310
Helix 11	AB2	A	151	155	Right-handed 310
Helix 12	AB3	A	179	184	Right-handed 310
Helix 13	AB4	A	186	193	Right-handed 310
Helix 14	AB5	A	250	254	Right-handed 310
Helix 15	AB6	A	258	287	Right-handed alpha
Helix 16	AB7	B	18	32	Right-handed alpha
Helix 17	AB8	B	37	41	Right-handed 310
Helix 18	AB9	B	48	50	Right-handed 310
Helix 19	AC1	B	51	57	Right-handed alpha
Helix 20	AC2	B	60	64	Right-handed 310
Helix 21	AC3	B	68	73	Right-handed alpha
Helix 22	AC4	B	74	77	Right-handed 310
Helix 23	AC5	B	107	118	Right-handed alpha
Helix 24	AC6	B	121	129	Right-handed alpha
Helix 25	AC7	B	140	144	Right-handed 310
Helix 26	AC8	B	151	155	Right-handed 310
Helix 27	AC9	B	179	184	Right-handed 310
Helix 28	AD1	B	186	190	Right-handed 310
Helix 29	AD2	B	250	254	Right-handed 310
Helix 30	AD3	B	258	279	Right-handed alpha
Helix 31	AD4	B	280	289	Right-handed alpha
Helix 32	AD5	C	18	32	Right-handed alpha
Helix 33	AD6	C	37	41	Right-handed 310
Helix 34	AD7	C	48	56	Right-handed 310
Helix 35	AD8	C	60	64	Right-handed 310
Helix 36	AD9	C	68	74	Right-handed alpha
Helix 37	AE1	C	75	77	Right-handed 310
Helix 38	AE2	C	107	118	Right-handed alpha
Helix 39	AE3	C	121	129	Right-handed alpha
Helix 40	AE4	C	179	184	Right-handed 310
Helix 41	AE5	C	186	188	Right-handed 310
Helix 42	AE6	C	189	194	Right-handed alpha
Helix 43	AE7	C	250	254	Right-handed 310
Helix 44	AE8	C	258	279	Right-handed alpha
Helix 45	AE9	C	280	287	Right-handed alpha
Helix 46	AF1	D	18	33	Right-handed alpha
Helix 47	AF2	D	37	41	Right-handed 310
Helix 48	AF3	D	48	56	Right-handed 310
Helix 49	AF4	D	60	64	Right-handed 310
Helix 50	AF5	D	68	73	Right-handed alpha
Helix 51	AF6	D	74	77	Right-handed 310
Helix 52	AF7	D	107	118	Right-handed alpha
Helix 53	AF8	D	121	129	Right-handed alpha
Helix 54	AF9	D	141	145	Right-handed 310
Helix 55	AG1	D	151	155	Right-handed 310
Helix 56	AG2	D	179	184	Right-handed 310
Helix 57	AG3	D	186	190	Right-handed 310
Helix 58	AG4	D	260	279	Right-handed alpha
Helix 59	AG5	D	280	287	Right-handed alpha

There are 8 sheets in PDB entry 5XEY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	12	13	first strand
Strand 2	A	46	47	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	86	89	first strand
Strand 2	A	95	104	anti-parallel
Strand 3	A	225	234	anti-parallel
Strand 4	A	211	221	anti-parallel
Strand 5	A	200	205	anti-parallel
Strand 6	A	170	178	anti-parallel
Strand 7	A	159	165	anti-parallel
Strand 8	A	133	137	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	86	89	first strand
Strand 2	A	95	104	anti-parallel
Strand 3	A	225	234	anti-parallel
Strand 4	A	211	221	anti-parallel
Strand 5	A	195	198	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	12	13	first strand
Strand 2	B	46	47	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	86	89	first strand
Strand 2	B	95	104	anti-parallel
Strand 3	B	225	234	anti-parallel
Strand 4	B	211	221	anti-parallel
Strand 5	B	195	205	anti-parallel
Strand 6	B	170	178	anti-parallel
Strand 7	B	159	165	anti-parallel
Strand 8	B	133	137	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	12	13	first strand
Strand 2	C	46	47	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	86	89	first strand
Strand 2	C	95	104	anti-parallel
Strand 3	C	225	234	anti-parallel
Strand 4	C	211	222	anti-parallel
Strand 5	C	195	205	anti-parallel
Strand 6	C	170	178	anti-parallel
Strand 7	C	159	165	anti-parallel
Strand 8	C	133	137	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	86	89	first strand
Strand 2	D	95	104	anti-parallel
Strand 3	D	225	234	anti-parallel
Strand 4	D	211	221	anti-parallel
Strand 5	D	195	205	anti-parallel
Strand 6	D	169	177	anti-parallel
Strand 7	D	159	166	anti-parallel
Strand 8	D	133	137	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5XEY

Analysis of interatomic Contacts of Structural Units in PDB entry:
5XEY