Analysis of interatomic Contacts of Structural Units in PDB entry:
5XF7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XF7 entry

There is 1 chain in PDB entry 5XF7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 32THR 495
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 5XF7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 60Right-handed alpha
Helix 2
AA2
A
72 90Right-handed alpha
Helix 3
AA3
A
106 113Right-handed alpha
Helix 4
AA4
A
140 154Right-handed alpha
Helix 5
AA5
A
161 172Right-handed alpha
Helix 6
AA6
A
185 195Right-handed alpha
Helix 7
AA7
A
196 198Right-handed 310
Helix 8
AA8
A
241 252Right-handed alpha
Helix 9
AA9
A
262 264Right-handed 310
Helix 10
AB1
A
265 273Right-handed alpha
Helix 11
AB2
A
288 301Right-handed alpha
Helix 12
AB3
A
316 318Right-handed 310
Helix 13
AB4
A
319 326Right-handed alpha
Helix 14
AB5
A
329 333Right-handed 310
Helix 15
AB6
A
355 368Right-handed alpha
Helix 16
AB7
A
382 386Right-handed 310
Helix 17
AB8
A
393 402Right-handed alpha
Helix 18
AB9
A
417 422Right-handed alpha
Helix 19
AC1
A
423 434Right-handed alpha
Helix 20
AC2
A
453 457Right-handed 310
Helix 21
AC3
A
481 494Right-handed alpha
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There are 4 sheets in PDB entry 5XF7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 42first strand
Strand 2
A
45 47anti-parallel
Strand 3
A
96 102parallel
Strand 4
A
62 68parallel
Strand 5
A
120 125anti-parallel
Strand 6
A
133 134anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 159first strand
Strand 2
A
203 207parallel
Strand 3
A
174 180parallel
Strand 4
A
221 226anti-parallel
Strand 5
A
229 235anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 260first strand
Strand 2
A
308 313parallel
Strand 3
A
276 282parallel
Strand 4
A
335 340anti-parallel
Strand 5
A
345 348anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
390 392first strand
Strand 2
A
440 446parallel
Strand 3
A
407 413parallel
Strand 4
A
462 466anti-parallel
Strand 5
A
474 475anti-parallel
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