Analysis of interatomic Contacts of Structural Units in PDB entry:
5XGI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XGI entry

There are 2 chains in PDB entry 5XGI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 8PHE 1059
B
 MET 322LEU 598
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 5XGI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
41 53Right-handed alpha
Helix 2
AA2
A
58 62Right-handed 310
Helix 3
AA3
A
64 68Right-handed 310
Helix 4
AA4
A
88 93Right-handed 310
Helix 5
AA5
A
107 122Right-handed alpha
Helix 6
AA6
A
125 130Right-handed alpha
Helix 7
AA7
A
133 143Right-handed alpha
Helix 8
AA8
A
143 154Right-handed alpha
Helix 9
AA9
A
159 167Right-handed alpha
Helix 10
AB1
A
178 183Right-handed alpha
Helix 11
AB2
A
216 227Right-handed alpha
Helix 12
AB3
A
238 246Right-handed alpha
Helix 13
AB4
A
266 269Right-handed 310
Helix 14
AB5
A
270 280Right-handed alpha
Helix 15
AB6
A
290 297Right-handed alpha
Helix 16
AB7
A
328 330Right-handed 310
Helix 17
AB8
A
394 396Right-handed 310
Helix 18
AB9
A
488 503Right-handed alpha
Helix 19
AC1
A
524 536Right-handed alpha
Helix 20
AC2
A
544 554Right-handed alpha
Helix 21
AC3
A
557 563Right-handed 310
Helix 22
AC4
A
564 572Right-handed alpha
Helix 23
AC5
A
576 589Right-handed alpha
Helix 24
AC6
A
594 599Right-handed alpha
Helix 25
AC7
A
600 603Right-handed 310
Helix 26
AC8
A
608 623Right-handed alpha
Helix 27
AC9
A
624 631Right-handed alpha
Helix 28
AD1
A
631 639Right-handed alpha
Helix 29
AD2
A
647 660Right-handed alpha
Helix 30
AD3
A
660 673Right-handed alpha
Helix 31
AD4
A
680 695Right-handed alpha
Helix 32
AD5
A
697 722Right-handed alpha
Helix 33
AD6
A
727 740Right-handed alpha
Helix 34
AD7
A
741 748Right-handed alpha
Helix 35
AD8
A
789 793Right-handed 310
Helix 36
AD9
A
807 827Right-handed alpha
Helix 37
AE1
A
857 862Right-handed alpha
Helix 38
AE2
A
875 885Right-handed alpha
Helix 39
AE3
A
890 912Right-handed alpha
Helix 40
AE4
A
939 943Right-handed 310
Helix 41
AE5
A
957 965Right-handed alpha
Helix 42
AE6
A
974 994Right-handed alpha
Helix 43
AE7
A
994 1004Right-handed alpha
Helix 44
AE8
A
1015 1026Right-handed alpha
Helix 45
AE9
A
1031 1047Right-handed alpha
Helix 46
AF1
B
339 348Right-handed alpha
Helix 47
AF2
B
400 410Right-handed alpha
Helix 48
AF3
B
417 421Right-handed 310
Helix 49
AF4
B
431 437Right-handed alpha
Helix 50
AF5
B
441 513Right-handed alpha
Helix 51
AF6
B
514 516Right-handed 310
Helix 52
AF7
B
517 586Right-handed alpha
Helix 53
AF8
B
590 598Right-handed alpha
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There are 10 sheets in PDB entry 5XGI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 36first strand
Strand 2
A
20 25anti-parallel
Strand 3
A
98 102parallel
Strand 4
A
69 73anti-parallel
Strand 5
A
79 81anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 212first strand
Strand 2
A
189 196anti-parallel
Strand 3
A
284 289parallel
Strand 4
A
250 254anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
324 326first strand
Strand 2
A
483 485parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
382 392first strand
Strand 2
A
333 341anti-parallel
Strand 3
A
472 477anti-parallel
Strand 4
A
439 444anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 366first strand
Strand 2
A
353 362anti-parallel
Strand 3
A
371 372anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 366first strand
Strand 2
A
353 362anti-parallel
Strand 3
A
401 410anti-parallel
Strand 4
A
418 428anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
751 753first strand
Strand 2
A
756 761anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
770 771first strand
Strand 2
A
779 784anti-parallel
Strand 3
A
796 802anti-parallel
Strand 4
A
845 849anti-parallel
Strand 5
A
838 842anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
854 856first strand
Strand 2
A
921 924anti-parallel
Strand 3
A
929 931anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
389 391first strand
Strand 2
B
377 386anti-parallel
Strand 3
B
368 374anti-parallel
Strand 4
B
354 359anti-parallel
Strand 5
B
426 427parallel
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