Analysis of interatomic Contacts of Structural Units in PDB entry:
5XGW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XGW entry

There are 2 chains in PDB entry 5XGW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 6GLU 395
B
 THR 6GLU 395
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 5XGW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
82 86Right-handed 310
Helix 2
AA2
A
91 97Right-handed alpha
Helix 3
AA3
A
115 130Right-handed alpha
Helix 4
AA4
A
150 158Right-handed alpha
Helix 5
AA5
A
178 197Right-handed alpha
Helix 6
AA6
A
213 223Right-handed alpha
Helix 7
AA7
A
226 228Right-handed 310
Helix 8
AA8
A
238 249Right-handed alpha
Helix 9
AA9
A
250 252Right-handed 310
Helix 10
AB1
A
270 281Right-handed alpha
Helix 11
AB2
A
284 286Right-handed 310
Helix 12
AB3
A
316 328Right-handed alpha
Helix 13
AB4
A
331 336Right-handed alpha
Helix 14
AB5
A
337 339Right-handed 310
Helix 15
AB6
A
340 348Right-handed alpha
Helix 16
AB7
B
82 86Right-handed 310
Helix 17
AB8
B
91 97Right-handed alpha
Helix 18
AB9
B
115 129Right-handed alpha
Helix 19
AC1
B
150 158Right-handed alpha
Helix 20
AC2
B
178 197Right-handed alpha
Helix 21
AC3
B
213 223Right-handed alpha
Helix 22
AC4
B
226 228Right-handed 310
Helix 23
AC5
B
238 249Right-handed alpha
Helix 24
AC6
B
250 252Right-handed 310
Helix 25
AC7
B
270 281Right-handed alpha
Helix 26
AC8
B
284 286Right-handed 310
Helix 27
AC9
B
315 328Right-handed alpha
Helix 28
AD1
B
331 336Right-handed alpha
Helix 29
AD2
B
337 339Right-handed 310
Helix 30
AD3
B
340 348Right-handed alpha
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There are 7 sheets in PDB entry 5XGW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 39first strand
Strand 2
A
21 30anti-parallel
Strand 3
A
8 17anti-parallel
Strand 4
A
53 65parallel
Strand 5
A
363 366anti-parallel
Strand 6
A
372 377anti-parallel
Strand 7
A
380 384anti-parallel
Strand 8
A
387 388anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 72first strand
Strand 2
A
100 105parallel
Strand 3
A
132 138parallel
Strand 4
A
161 169parallel
Strand 5
A
201 206parallel
Strand 6
A
230 233parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
255 258first strand
Strand 2
A
288 291parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 39first strand
Strand 2
B
21 30anti-parallel
Strand 3
B
8 17anti-parallel
Strand 4
B
53 57parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 39first strand
Strand 2
B
21 30anti-parallel
Strand 3
B
8 17anti-parallel
Strand 4
B
62 65parallel
Strand 5
B
363 366anti-parallel
Strand 6
B
372 377anti-parallel
Strand 7
B
380 384anti-parallel
Strand 8
B
387 388anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 72first strand
Strand 2
B
100 105parallel
Strand 3
B
132 138parallel
Strand 4
B
161 169parallel
Strand 5
B
201 206parallel
Strand 6
B
230 233parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
255 258first strand
Strand 2
B
288 291parallel
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