Analysis of interatomic Contacts of Structural Units in PDB entry:
5XHU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XHU entry

There is 1 chain in PDB entry 5XHU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 6VAL 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 5XHU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 29Right-handed alpha
Helix 2
AA2
A
43 50Right-handed alpha
Helix 3
AA3
A
66 79Right-handed alpha
Helix 4
AA4
A
131 139Right-handed alpha
Helix 5
AA5
A
149 154Right-handed 310
Helix 6
AA6
A
164 175Right-handed alpha
Helix 7
AA7
A
193 203Right-handed alpha
Helix 8
AA8
A
254 260Right-handed 310
Helix 9
AA9
A
297 317Right-handed alpha
Helix 10
AB1
A
326 330Right-handed 310
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There are 7 sheets in PDB entry 5XHU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 85first strand
Strand 2
A
33 36parallel
Strand 3
A
7 13parallel
Strand 4
A
110 118parallel
Strand 5
A
101 105anti-parallel
Strand 6
A
90 95anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 85first strand
Strand 2
A
33 36parallel
Strand 3
A
7 13parallel
Strand 4
A
110 118parallel
Strand 5
A
282 284parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 55first strand
Strand 2
A
64 65anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 127first strand
Strand 2
A
250 251anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 144first strand
Strand 2
A
243 246parallel
Strand 3
A
157 161parallel
Strand 4
A
180 184parallel
Strand 5
A
206 208parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 218first strand
Strand 2
A
223 230anti-parallel
Strand 3
A
236 240anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 265first strand
Strand 2
A
268 270anti-parallel
Strand 3
A
289 290parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il