Analysis of interatomic Contacts of Structural Units in PDB entry:
5XHV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XHV entry

There are 6 chains in PDB entry 5XHV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 31ARG 313
E
 ASN 31ARG 313
H
 GLU 1CYS 223
L
 ASP 1CYS 214
P
 GLU 1CYS 223
Q
 ASP 1CYS 214
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 5XHV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
56 63Right-handed alpha
Helix 2
AA2
A
64 71Right-handed 310
Helix 3
AA3
A
97 107Right-handed alpha
Helix 4
AA4
A
184 193Right-handed alpha
Helix 5
AA5
E
56 63Right-handed alpha
Helix 6
AA6
E
64 71Right-handed 310
Helix 7
AA7
E
97 106Right-handed alpha
Helix 8
AA8
E
184 192Right-handed alpha
Helix 9
AA9
H
87 91Right-handed 310
Helix 10
AB1
H
161 165Right-handed 310
Helix 11
AB2
H
192 196Right-handed 310
Helix 12
AB3
H
208 211Right-handed 310
Helix 13
AB4
L
121 126Right-handed alpha
Helix 14
AB5
L
183 189Right-handed alpha
Helix 15
AB6
P
62 65Right-handed 310
Helix 16
AB7
P
74 77Right-handed 310
Helix 17
AB8
Q
182 187Right-handed alpha
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There are 30 sheets in PDB entry 5XHV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 51first strand
Strand 2
A
79 81parallel
Strand 3
A
265 267parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 76first strand
Strand 2
A
108 110anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 115first strand
Strand 2
A
253 256anti-parallel
Strand 3
A
173 181anti-parallel
Strand 4
A
248 251anti-parallel
Strand 5
A
148 150anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 115first strand
Strand 2
A
253 256anti-parallel
Strand 3
A
173 181anti-parallel
Strand 4
A
226 234anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 166first strand
Strand 2
A
239 244anti-parallel
Strand 3
A
199 203anti-parallel
Strand 4
A
207 210anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
279 280first strand
Strand 2
A
300 301anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
292 293first strand
Strand 2
A
305 306parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
50 51first strand
Strand 2
E
79 81parallel
Strand 3
E
265 267parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
108 115first strand
Strand 2
E
253 259anti-parallel
Strand 3
E
173 181anti-parallel
Strand 4
E
248 251anti-parallel
Strand 5
E
148 150anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
108 115first strand
Strand 2
E
253 259anti-parallel
Strand 3
E
173 181anti-parallel
Strand 4
E
226 234anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
133 138first strand
Strand 2
E
141 143anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
161 166first strand
Strand 2
E
239 244anti-parallel
Strand 3
E
199 203anti-parallel
Strand 4
E
207 210anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 7first strand
Strand 2
H
16 25anti-parallel
Strand 3
H
78 86anti-parallel
Strand 4
H
68 73anti-parallel
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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
11 12first strand
Strand 2
H
115 118parallel
Strand 3
H
92 99anti-parallel
Strand 4
H
33 39anti-parallel
Strand 5
H
45 52anti-parallel
Strand 6
H
57 60anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
127 131first strand
Strand 2
H
144 152anti-parallel
Strand 3
H
183 190anti-parallel
Strand 4
H
170 172anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
127 131first strand
Strand 2
H
144 152anti-parallel
Strand 3
H
183 190anti-parallel
Strand 4
H
176 177anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
201 207first strand
Strand 2
H
212 218anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
4 7first strand
Strand 2
L
19 25anti-parallel
Strand 3
L
70 75anti-parallel
Strand 4
L
65 67anti-parallel
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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 13first strand
Strand 2
L
102 106parallel
Strand 3
L
85 90anti-parallel
Strand 4
L
33 38anti-parallel
Strand 5
L
45 48anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 13first strand
Strand 2
L
102 106parallel
Strand 3
L
85 90anti-parallel
Strand 4
L
97 98anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
114 118first strand
Strand 2
L
129 139anti-parallel
Strand 3
L
173 182anti-parallel
Strand 4
L
160 163anti-parallel
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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
145 150first strand
Strand 2
L
191 197anti-parallel
Strand 3
L
205 210anti-parallel
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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
P
6 7first strand
Strand 2
P
17 22anti-parallel
Strand 3
P
78 84anti-parallel
Strand 4
P
68 73anti-parallel
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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
P
57 60first strand
Strand 2
P
46 52anti-parallel
Strand 3
P
33 39anti-parallel
Strand 4
P
92 99anti-parallel
Strand 5
P
114 116anti-parallel
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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
P
127 131first strand
Strand 2
P
144 152anti-parallel
Strand 3
P
183 190anti-parallel
Strand 4
P
176 177anti-parallel
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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
P
160 161first strand
Strand 2
P
202 207anti-parallel
Strand 3
P
212 217anti-parallel
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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
4 7first strand
Strand 2
Q
19 25anti-parallel
Strand 3
Q
70 75anti-parallel
Strand 4
Q
62 67anti-parallel
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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
10 14first strand
Strand 2
Q
102 107parallel
Strand 3
Q
85 90anti-parallel
Strand 4
Q
33 38anti-parallel
Strand 5
Q
45 49anti-parallel
Strand 6
Q
53 54anti-parallel
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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
130 139first strand
Strand 2
Q
173 181anti-parallel
Strand 3
Q
160 163anti-parallel
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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
153 154first strand
Strand 2
Q
144 150anti-parallel
Strand 3
Q
191 198anti-parallel
Strand 4
Q
207 210anti-parallel
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