Analysis of interatomic Contacts of Structural Units in PDB entry:
5XJG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XJG entry

There are 4 chains in PDB entry 5XJG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 19GLY 512
B
LEU 292TYR 321
C
PRO 19GLY 512
D
LEU 292TYR 321
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 75 helices in PDB entry 5XJG. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
20 34Right-handed alpha
Helix 2
AA2
A
45 57Right-handed alpha
Helix 3
AA3
A
60 78Right-handed alpha
Helix 4
AA4
A
83 94Right-handed alpha
Helix 5
AA5
A
98 113Right-handed alpha
Helix 6
AA6
A
115 125Right-handed alpha
Helix 7
AA7
A
127 136Right-handed alpha
Helix 8
AA8
A
139 154Right-handed alpha
Helix 9
AA9
A
156 165Right-handed alpha
Helix 10
AB1
A
168 176Right-handed alpha
Helix 11
AB2
A
180 194Right-handed alpha
Helix 12
AB3
A
197 208Right-handed alpha
Helix 13
AB4
A
208 217Right-handed alpha
Helix 14
AB5
A
221 236Right-handed alpha
Helix 15
AB6
A
238 249Right-handed alpha
Helix 16
AB7
A
251 260Right-handed alpha
Helix 17
AB8
A
264 279Right-handed alpha
Helix 18
AB9
A
281 291Right-handed alpha
Helix 19
AC1
A
292 302Right-handed alpha
Helix 20
AC2
A
305 320Right-handed alpha
Helix 21
AC3
A
321 324Right-handed 310
Helix 22
AC4
A
325 332Right-handed alpha
Helix 23
AC5
A
334 341Right-handed alpha
Helix 24
AC6
A
342 344Right-handed 310
Helix 25
AC7
A
347 361Right-handed alpha
Helix 26
AC8
A
365 374Right-handed alpha
Helix 27
AC9
A
376 385Right-handed alpha
Helix 28
AD1
A
389 404Right-handed alpha
Helix 29
AD2
A
405 408Right-handed 310
Helix 30
AD3
A
409 416Right-handed alpha
Helix 31
AD4
A
418 426Right-handed alpha
Helix 32
AD5
A
430 445Right-handed alpha
Helix 33
AD6
A
451 457Right-handed alpha
Helix 34
AD7
A
463 475Right-handed alpha
Helix 35
AD8
A
477 494Right-handed alpha
Helix 36
AD9
A
496 504Right-handed alpha
Helix 37
AE1
A
505 512Right-handed alpha
Helix 38
AE2
C
20 34Right-handed alpha
Helix 39
AE3
C
45 57Right-handed alpha
Helix 40
AE4
C
60 78Right-handed alpha
Helix 41
AE5
C
83 94Right-handed alpha
Helix 42
AE6
C
98 113Right-handed alpha
Helix 43
AE7
C
115 125Right-handed alpha
Helix 44
AE8
C
127 136Right-handed alpha
Helix 45
AE9
C
139 154Right-handed alpha
Helix 46
AF1
C
156 165Right-handed alpha
Helix 47
AF2
C
168 176Right-handed alpha
Helix 48
AF3
C
180 194Right-handed alpha
Helix 49
AF4
C
197 207Right-handed alpha
Helix 50
AF5
C
208 216Right-handed alpha
Helix 51
AF6
C
217 219Right-handed 310
Helix 52
AF7
C
221 236Right-handed alpha
Helix 53
AF8
C
238 249Right-handed alpha
Helix 54
AF9
C
251 260Right-handed alpha
Helix 55
AG1
C
264 279Right-handed alpha
Helix 56
AG2
C
281 291Right-handed alpha
Helix 57
AG3
C
292 301Right-handed alpha
Helix 58
AG4
C
305 320Right-handed alpha
Helix 59
AG5
C
321 324Right-handed 310
Helix 60
AG6
C
325 332Right-handed alpha
Helix 61
AG7
C
334 341Right-handed alpha
Helix 62
AG8
C
342 344Right-handed 310
Helix 63
AG9
C
347 361Right-handed alpha
Helix 64
AH1
C
365 375Right-handed alpha
Helix 65
AH2
C
376 385Right-handed alpha
Helix 66
AH3
C
389 404Right-handed alpha
Helix 67
AH4
C
405 408Right-handed 310
Helix 68
AH5
C
409 416Right-handed alpha
Helix 69
AH6
C
418 426Right-handed alpha
Helix 70
AH7
C
430 445Right-handed alpha
Helix 71
AH8
C
451 457Right-handed alpha
Helix 72
AH9
C
463 474Right-handed alpha
Helix 73
AI1
C
477 494Right-handed alpha
Helix 74
AI2
C
496 503Right-handed alpha
Helix 75
AI3
C
505 510Right-handed alpha
Back to top of page
There are no sheets in PDB entry 5XJG

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il