Analysis of interatomic Contacts of Structural Units in PDB entry:
5XLS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XLS entry

There is 1 chain in PDB entry 5XLS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 5LEU 412
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 5XLS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 40Right-handed alpha
Helix 2
AA2
A
42 61Right-handed alpha
Helix 3
AA3
A
75 83Right-handed alpha
Helix 4
AA4
A
84 86Right-handed 310
Helix 5
AA5
A
87 112Right-handed alpha
Helix 6
AA6
A
115 120Right-handed alpha
Helix 7
AA7
A
121 135Right-handed alpha
Helix 8
AA8
A
136 144Right-handed alpha
Helix 9
AA9
A
155 176Right-handed alpha
Helix 10
AB1
A
179 182Right-handed 310
Helix 11
AB2
A
183 199Right-handed alpha
Helix 12
AB3
A
204 208Right-handed 310
Helix 13
AB4
A
224 254Right-handed alpha
Helix 14
AB5
A
262 280Right-handed alpha
Helix 15
AB6
A
288 299Right-handed alpha
Helix 16
AB7
A
302 319Right-handed alpha
Helix 17
AB8
A
319 329Right-handed alpha
Helix 18
AB9
A
330 356Right-handed alpha
Helix 19
AC1
A
362 379Right-handed alpha
Helix 20
AC2
A
391 412Right-handed alpha
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There are 2 sheets in PDB entry 5XLS. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 71first strand
Strand 2
A
285 287anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
381 384first strand
Strand 2
A
387 390anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il