Analysis of interatomic Contacts of Structural Units in PDB entry:
5XLV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XLV entry

There are 2 chains in PDB entry 5XLV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 7LEU 312
B
 PRO 7LEU 312
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 5XLV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 21Right-handed alpha
Helix 2
AA2
A
30 37Right-handed alpha
Helix 3
AA3
A
38 41Right-handed 310
Helix 4
AA4
A
45 52Right-handed alpha
Helix 5
AA5
A
52 78Right-handed alpha
Helix 6
AA6
A
102 115Right-handed alpha
Helix 7
AA7
A
129 132Right-handed 310
Helix 8
AA8
A
134 141Right-handed alpha
Helix 9
AA9
A
143 147Right-handed 310
Helix 10
AB1
A
149 153Right-handed 310
Helix 11
AB2
A
154 167Right-handed alpha
Helix 12
AB3
A
213 218Right-handed 310
Helix 13
AB4
A
227 243Right-handed alpha
Helix 14
AB5
A
244 249Right-handed 310
Helix 15
AB6
A
254 258Right-handed 310
Helix 16
AB7
A
261 276Right-handed alpha
Helix 17
AB8
A
276 285Right-handed alpha
Helix 18
AB9
A
286 292Right-handed 310
Helix 19
AC1
B
15 21Right-handed alpha
Helix 20
AC2
B
31 35Right-handed 310
Helix 21
AC3
B
45 52Right-handed alpha
Helix 22
AC4
B
52 79Right-handed alpha
Helix 23
AC5
B
102 116Right-handed alpha
Helix 24
AC6
B
129 132Right-handed 310
Helix 25
AC7
B
134 141Right-handed alpha
Helix 26
AC8
B
143 147Right-handed 310
Helix 27
AC9
B
149 153Right-handed 310
Helix 28
AD1
B
154 167Right-handed alpha
Helix 29
AD2
B
213 218Right-handed 310
Helix 30
AD3
B
227 243Right-handed alpha
Helix 31
AD4
B
263 276Right-handed alpha
Helix 32
AD5
B
276 285Right-handed alpha
Helix 33
AD6
B
286 292Right-handed 310
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There are 6 sheets in PDB entry 5XLV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 14first strand
Strand 2
A
304 310anti-parallel
Strand 3
A
294 298anti-parallel
Strand 4
A
220 225parallel
Strand 5
A
91 96parallel
Strand 6
A
197 201parallel
Strand 7
A
123 127parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 174first strand
Strand 2
A
190 192anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 178first strand
Strand 2
A
183 184anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 14first strand
Strand 2
B
304 310anti-parallel
Strand 3
B
294 298anti-parallel
Strand 4
B
220 225parallel
Strand 5
B
91 96parallel
Strand 6
B
197 201parallel
Strand 7
B
123 127parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 174first strand
Strand 2
B
190 192anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
177 178first strand
Strand 2
B
183 184anti-parallel
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