Analysis of interatomic Contacts of Structural Units in PDB entry:
5XN7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5XN7 entry

There are 2 chains in PDB entry 5XN7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 2284	LYS 2886
B	ASN 2284	GLU 2881

There are 55 helices in PDB entry 5XN7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2323	2331	Right-handed alpha
Helix 2	AA2	A	2377	2385	Right-handed alpha
Helix 3	AA3	A	2393	2410	Right-handed alpha
Helix 4	AA4	A	2418	2438	Right-handed alpha
Helix 5	AA5	A	2443	2463	Right-handed alpha
Helix 6	AA6	A	2476	2482	Right-handed alpha
Helix 7	AA7	A	2483	2488	Right-handed alpha
Helix 8	AA8	A	2509	2516	Right-handed alpha
Helix 9	AA9	A	2521	2546	Right-handed alpha
Helix 10	AB1	A	2548	2553	Right-handed alpha
Helix 11	AB2	A	2560	2576	Right-handed alpha
Helix 12	AB3	A	2609	2619	Right-handed alpha
Helix 13	AB4	A	2625	2636	Right-handed alpha
Helix 14	AB5	A	2650	2655	Right-handed 310
Helix 15	AB6	A	2679	2693	Right-handed alpha
Helix 16	AB7	A	2707	2716	Right-handed alpha
Helix 17	AB8	A	2716	2721	Right-handed alpha
Helix 18	AB9	A	2722	2724	Right-handed 310
Helix 19	AC1	A	2726	2740	Right-handed alpha
Helix 20	AC2	A	2743	2762	Right-handed alpha
Helix 21	AC3	A	2764	2795	Right-handed alpha
Helix 22	AC4	A	2809	2820	Right-handed alpha
Helix 23	AC5	A	2823	2832	Right-handed alpha
Helix 24	AC6	A	2834	2846	Right-handed alpha
Helix 25	AC7	A	2847	2853	Right-handed alpha
Helix 26	AC8	A	2858	2862	Right-handed 310
Helix 27	AC9	A	2864	2884	Right-handed alpha
Helix 28	AD1	B	2318	2331	Right-handed alpha
Helix 29	AD2	B	2333	2337	Right-handed 310
Helix 30	AD3	B	2377	2385	Right-handed alpha
Helix 31	AD4	B	2393	2413	Right-handed alpha
Helix 32	AD5	B	2417	2438	Right-handed alpha
Helix 33	AD6	B	2443	2463	Right-handed alpha
Helix 34	AD7	B	2477	2482	Right-handed alpha
Helix 35	AD8	B	2521	2536	Right-handed alpha
Helix 36	AD9	B	2536	2546	Right-handed alpha
Helix 37	AE1	B	2548	2553	Right-handed alpha
Helix 38	AE2	B	2560	2576	Right-handed alpha
Helix 39	AE3	B	2609	2619	Right-handed alpha
Helix 40	AE4	B	2625	2636	Right-handed alpha
Helix 41	AE5	B	2650	2654	Right-handed 310
Helix 42	AE6	B	2679	2695	Right-handed alpha
Helix 43	AE7	B	2701	2704	Right-handed 310
Helix 44	AE8	B	2705	2716	Right-handed alpha
Helix 45	AE9	B	2716	2721	Right-handed alpha
Helix 46	AF1	B	2726	2729	Right-handed 310
Helix 47	AF2	B	2730	2738	Right-handed alpha
Helix 48	AF3	B	2745	2762	Right-handed alpha
Helix 49	AF4	B	2764	2795	Right-handed alpha
Helix 50	AF5	B	2809	2821	Right-handed alpha
Helix 51	AF6	B	2823	2832	Right-handed alpha
Helix 52	AF7	B	2834	2846	Right-handed alpha
Helix 53	AF8	B	2847	2853	Right-handed alpha
Helix 54	AF9	B	2858	2862	Right-handed 310
Helix 55	AG1	B	2864	2880	Right-handed alpha

There are 8 sheets in PDB entry 5XN7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2286	2288	first strand
Strand 2	A	2294	2297	anti-parallel
Strand 3	A	2309	2311	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2340	2343	first strand
Strand 2	A	2347	2352	anti-parallel
Strand 3	A	2355	2361	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2496	2497	first strand
Strand 2	A	2503	2504	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2620	2621	first strand
Strand 2	A	2595	2600	anti-parallel
Strand 3	A	2580	2587	anti-parallel
Strand 4	A	2798	2805	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2285	2287	first strand
Strand 2	B	2296	2298	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2310	2312	first strand
Strand 2	B	2340	2342	parallel
Strand 3	B	2347	2352	anti-parallel
Strand 4	B	2355	2361	anti-parallel
Strand 5	B	2368	2369	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2496	2497	first strand
Strand 2	B	2503	2504	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2620	2621	first strand
Strand 2	B	2595	2600	anti-parallel
Strand 3	B	2580	2587	anti-parallel
Strand 4	B	2798	2805	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5XN7

Analysis of interatomic Contacts of Structural Units in PDB entry:
5XN7