Analysis of interatomic Contacts of Structural Units in PDB entry:
5XNT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XNT entry

There is 1 chain in PDB entry 5XNT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 7LEU 411
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 5XNT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 12Right-handed alpha
Helix 2
AA2
A
15 21Right-handed alpha
Helix 3
AA3
A
22 33Right-handed alpha
Helix 4
AA4
A
48 58Right-handed alpha
Helix 5
AA5
A
87 91Right-handed 310
Helix 6
AA6
A
94 105Right-handed alpha
Helix 7
AA7
A
108 129Right-handed alpha
Helix 8
AA8
A
138 142Right-handed alpha
Helix 9
AA9
A
144 156Right-handed alpha
Helix 10
AB1
A
158 160Right-handed 310
Helix 11
AB2
A
161 174Right-handed alpha
Helix 12
AB3
A
183 209Right-handed alpha
Helix 13
AB4
A
213 221Right-handed alpha
Helix 14
AB5
A
229 262Right-handed alpha
Helix 15
AB6
A
265 273Right-handed alpha
Helix 16
AB7
A
276 288Right-handed alpha
Helix 17
AB8
A
319 323Right-handed alpha
Helix 18
AB9
A
341 345Right-handed 310
Helix 19
AC1
A
357 375Right-handed alpha
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There are 3 sheets in PDB entry 5XNT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 37first strand
Strand 2
A
43 46anti-parallel
Strand 3
A
314 318parallel
Strand 4
A
293 298anti-parallel
Strand 5
A
62 63anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 137first strand
Strand 2
A
404 409anti-parallel
Strand 3
A
376 381anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
391 394first strand
Strand 2
A
397 400anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il