Analysis of interatomic Contacts of Structural Units in PDB entry:
5XNW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XNW entry

There is 1 chain in PDB entry 5XNW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 26ALA 355
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 5XNW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 39Right-handed alpha
Helix 2
AA2
A
43 58Right-handed alpha
Helix 3
AA3
A
67 69Right-handed 310
Helix 4
AA4
A
70 76Right-handed alpha
Helix 5
AA5
A
102 106Right-handed 310
Helix 6
AA6
A
112 128Right-handed alpha
Helix 7
AA7
A
140 151Right-handed alpha
Helix 8
AA8
A
269 281Right-handed alpha
Helix 9
AA9
A
335 349Right-handed alpha
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There are 4 sheets in PDB entry 5XNW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 220first strand
Strand 2
A
59 63anti-parallel
Strand 3
A
308 311anti-parallel
Strand 4
A
330 333anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 136first strand
Strand 2
A
198 201anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 139first strand
Strand 2
A
186 190anti-parallel
Strand 3
A
173 180anti-parallel
Strand 4
A
161 167anti-parallel
Strand 5
A
154 156anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
316 317first strand
Strand 2
A
326 327anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il