Analysis of interatomic Contacts of Structural Units in PDB entry:
5XOJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XOJ entry

There are 6 chains in PDB entry 5XOJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 10VAL 179
C
 ASP 10ASP 1054
D
 ASN 34GLY 52
E
 ALA 91PHE 97
F
 SER 90GLY 98
G
 THR 110PRO 117
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 5XOJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 35Right-handed alpha
Helix 2
AA2
A
71 75Right-handed 310
Helix 3
AA3
A
77 83Right-handed 310
Helix 4
AA4
A
96 102Right-handed alpha
Helix 5
AA5
A
102 112Right-handed alpha
Helix 6
AA6
A
140 145Right-handed alpha
Helix 7
AA7
A
160 172Right-handed alpha
Helix 8
AA8
C
12 26Right-handed alpha
Helix 9
AA9
C
27 44Right-handed alpha
Helix 10
AB1
C
47 58Right-handed alpha
Helix 11
AB2
C
60 79Right-handed alpha
Helix 12
AB3
C
80 82Right-handed 310
Helix 13
AB4
C
83 104Right-handed alpha
Helix 14
AB5
C
104 111Right-handed alpha
Helix 15
AB6
C
111 130Right-handed alpha
Helix 16
AB7
C
136 145Right-handed alpha
Helix 17
AB8
C
148 168Right-handed alpha
Helix 18
AB9
C
175 204Right-handed alpha
Helix 19
AC1
C
206 221Right-handed alpha
Helix 20
AC2
C
226 231Right-handed alpha
Helix 21
AC3
C
233 242Right-handed alpha
Helix 22
AC4
C
248 260Right-handed alpha
Helix 23
AC5
C
268 290Right-handed alpha
Helix 24
AC6
C
296 304Right-handed alpha
Helix 25
AC7
C
307 332Right-handed alpha
Helix 26
AC8
C
333 335Right-handed 310
Helix 27
AC9
C
336 351Right-handed alpha
Helix 28
AD1
C
355 376Right-handed alpha
Helix 29
AD2
C
416 419Right-handed 310
Helix 30
AD3
C
420 433Right-handed alpha
Helix 31
AD4
C
459 479Right-handed alpha
Helix 32
AD5
C
479 496Right-handed alpha
Helix 33
AD6
C
501 513Right-handed alpha
Helix 34
AD7
C
520 542Right-handed alpha
Helix 35
AD8
C
544 561Right-handed alpha
Helix 36
AD9
C
562 569Right-handed alpha
Helix 37
AE1
C
569 584Right-handed alpha
Helix 38
AE2
C
590 607Right-handed alpha
Helix 39
AE3
C
607 612Right-handed alpha
Helix 40
AE4
C
620 628Right-handed alpha
Helix 41
AE5
C
628 633Right-handed alpha
Helix 42
AE6
C
637 653Right-handed alpha
Helix 43
AE7
C
657 669Right-handed alpha
Helix 44
AE8
C
669 686Right-handed alpha
Helix 45
AE9
C
688 691Right-handed 310
Helix 46
AF1
C
692 714Right-handed alpha
Helix 47
AF2
C
717 747Right-handed alpha
Helix 48
AF3
C
748 752Right-handed 310
Helix 49
AF4
C
753 777Right-handed alpha
Helix 50
AF5
C
779 786Right-handed alpha
Helix 51
AF6
C
787 802Right-handed alpha
Helix 52
AF7
C
809 823Right-handed alpha
Helix 53
AF8
C
826 846Right-handed alpha
Helix 54
AF9
C
852 870Right-handed alpha
Helix 55
AG1
C
871 876Right-handed alpha
Helix 56
AG2
C
878 894Right-handed alpha
Helix 57
AG3
C
897 919Right-handed alpha
Helix 58
AG4
C
921 945Right-handed alpha
Helix 59
AG5
C
948 950Right-handed 310
Helix 60
AG6
C
951 968Right-handed alpha
Helix 61
AG7
C
986 1003Right-handed alpha
Helix 62
AG8
C
1007 1019Right-handed alpha
Helix 63
AG9
C
1024 1039Right-handed alpha
Helix 64
AH1
C
1045 1051Right-handed 310
Helix 65
AH2
D
35 44Right-handed alpha
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There are 2 sheets in PDB entry 5XOJ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 56first strand
Strand 2
A
59 68anti-parallel
Strand 3
A
12 19parallel
Strand 4
A
87 93parallel
Strand 5
A
119 124parallel
Strand 6
A
147 150parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
441 445first strand
Strand 2
C
451 455anti-parallel
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