Analysis of interatomic Contacts of Structural Units in PDB entry:
5XPX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XPX entry

There are 2 chains in PDB entry 5XPX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 4ARG 387
E
 ASP 7ARG 387
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 5XPX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 27Right-handed 310
Helix 2
AA2
A
31 35Right-handed 310
Helix 3
AA3
A
36 44Right-handed alpha
Helix 4
AA4
A
58 72Right-handed alpha
Helix 5
AA5
A
78 86Right-handed alpha
Helix 6
AA6
A
98 102Right-handed 310
Helix 7
AA7
A
114 129Right-handed alpha
Helix 8
AA8
A
130 141Right-handed alpha
Helix 9
AA9
A
145 149Right-handed 310
Helix 10
AB1
A
168 173Right-handed 310
Helix 11
AB2
A
175 191Right-handed alpha
Helix 12
AB3
A
220 230Right-handed alpha
Helix 13
AB4
A
231 236Right-handed alpha
Helix 14
AB5
A
239 245Right-handed alpha
Helix 15
AB6
A
245 256Right-handed alpha
Helix 16
AB7
A
288 295Right-handed alpha
Helix 17
AB8
A
295 300Right-handed alpha
Helix 18
AB9
A
304 308Right-handed 310
Helix 19
AC1
A
310 314Right-handed 310
Helix 20
AC2
A
321 326Right-handed 310
Helix 21
AC3
A
371 384Right-handed alpha
Helix 22
AC4
E
23 27Right-handed 310
Helix 23
AC5
E
31 35Right-handed 310
Helix 24
AC6
E
36 44Right-handed alpha
Helix 25
AC7
E
58 72Right-handed alpha
Helix 26
AC8
E
78 86Right-handed alpha
Helix 27
AC9
E
98 102Right-handed 310
Helix 28
AD1
E
114 129Right-handed alpha
Helix 29
AD2
E
130 141Right-handed alpha
Helix 30
AD3
E
145 149Right-handed 310
Helix 31
AD4
E
168 173Right-handed 310
Helix 32
AD5
E
175 191Right-handed alpha
Helix 33
AD6
E
208 212Right-handed 310
Helix 34
AD7
E
220 230Right-handed alpha
Helix 35
AD8
E
231 236Right-handed alpha
Helix 36
AD9
E
239 245Right-handed alpha
Helix 37
AE1
E
245 254Right-handed alpha
Helix 38
AE2
E
288 295Right-handed alpha
Helix 39
AE3
E
295 300Right-handed alpha
Helix 40
AE4
E
310 314Right-handed 310
Helix 41
AE5
E
321 326Right-handed 310
Helix 42
AE6
E
371 385Right-handed alpha
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There are 6 sheets in PDB entry 5XPX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 51first strand
Strand 2
A
10 13parallel
Strand 3
A
107 112parallel
Strand 4
A
155 161parallel
Strand 5
A
263 269parallel
Strand 6
A
348 354parallel
Strand 7
A
336 338parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 76first strand
Strand 2
A
90 94anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 274first strand
Strand 2
A
281 283anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
48 50first strand
Strand 2
E
10 13parallel
Strand 3
E
107 112parallel
Strand 4
E
156 161parallel
Strand 5
E
263 270parallel
Strand 6
E
348 355parallel
Strand 7
E
336 338parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
73 76first strand
Strand 2
E
90 94anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
272 274first strand
Strand 2
E
281 283anti-parallel
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