Analysis of interatomic Contacts of Structural Units in PDB entry:
5XQZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XQZ entry

There are 4 chains in PDB entry 5XQZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 33GLY 212
C
 SER 21LEU 85
B
 ALA 24ARG 216
D
 SER 20LEU 87
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 5XQZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 45Right-handed alpha
Helix 2
AA2
A
52 74Right-handed alpha
Helix 3
AA3
A
110 127Right-handed alpha
Helix 4
AA4
A
143 166Right-handed alpha
Helix 5
AA5
A
166 173Right-handed alpha
Helix 6
AA6
A
175 193Right-handed alpha
Helix 7
AA7
A
197 202Right-handed alpha
Helix 8
AA8
A
204 212Right-handed alpha
Helix 9
AA9
C
22 57Right-handed alpha
Helix 10
AB1
C
59 84Right-handed alpha
Helix 11
AB2
B
30 34Right-handed 310
Helix 12
AB3
B
40 45Right-handed alpha
Helix 13
AB4
B
52 74Right-handed alpha
Helix 14
AB5
B
110 127Right-handed alpha
Helix 15
AB6
B
143 166Right-handed alpha
Helix 16
AB7
B
166 173Right-handed alpha
Helix 17
AB8
B
175 194Right-handed alpha
Helix 18
AB9
B
201 203Right-handed 310
Helix 19
AC1
B
204 211Right-handed alpha
Helix 20
AC2
B
212 214Right-handed 310
Helix 21
AC3
D
21 57Right-handed alpha
Helix 22
AC4
D
59 84Right-handed alpha
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There are 2 sheets in PDB entry 5XQZ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 88first strand
Strand 2
A
94 95anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
87 88first strand
Strand 2
B
94 95anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il