Analysis of interatomic Contacts of Structural Units in PDB entry:
5XR3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5XR3 entry

There are 16 chains in PDB entry 5XR3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 8	LEU 189
A	HIS 191	LEU 293
B	ASP 4	LEU 189
B	HIS 191	GLN 290
C	ASN 6	LEU 189
C	HIS 191	HIS 295
D	GLU 7	LEU 189
D	HIS 191	GLN 290
E	LEU 8	LEU 189
E	HIS 191	LYS 292
F	GLU 7	LEU 189
F	HIS 191	GLN 290
G	VAL 5	LEU 189
G	HIS 191	HIS 296
H	ASN 6	LEU 189
H	HIS 191	LYS 292

There are112 helices in PDB entry 5XR3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	25	33	Right-handed alpha
Helix 2	AA2	A	78	92	Right-handed alpha
Helix 3	AA3	A	109	113	Right-handed 310
Helix 4	AA4	A	117	133	Right-handed alpha
Helix 5	AA5	A	137	145	Right-handed alpha
Helix 6	AA6	A	159	164	Right-handed 310
Helix 7	AA7	A	165	168	Right-handed 310
Helix 8	AA8	A	169	182	Right-handed alpha
Helix 9	AA9	A	191	201	Right-handed 310
Helix 10	AB1	A	217	223	Right-handed alpha
Helix 11	AB2	A	223	228	Right-handed alpha
Helix 12	AB3	A	238	246	Right-handed alpha
Helix 13	AB4	A	270	272	Right-handed 310
Helix 14	AB5	A	273	291	Right-handed alpha
Helix 15	AB6	B	25	33	Right-handed alpha
Helix 16	AB7	B	78	93	Right-handed alpha
Helix 17	AB8	B	109	113	Right-handed 310
Helix 18	AB9	B	117	133	Right-handed alpha
Helix 19	AC1	B	137	145	Right-handed alpha
Helix 20	AC2	B	160	164	Right-handed 310
Helix 21	AC3	B	165	168	Right-handed 310
Helix 22	AC4	B	169	182	Right-handed alpha
Helix 23	AC5	B	191	199	Right-handed 310
Helix 24	AC6	B	217	223	Right-handed alpha
Helix 25	AC7	B	223	228	Right-handed alpha
Helix 26	AC8	B	238	245	Right-handed alpha
Helix 27	AC9	B	270	272	Right-handed 310
Helix 28	AD1	B	273	289	Right-handed alpha
Helix 29	AD2	C	25	33	Right-handed alpha
Helix 30	AD3	C	78	93	Right-handed alpha
Helix 31	AD4	C	109	113	Right-handed 310
Helix 32	AD5	C	117	133	Right-handed alpha
Helix 33	AD6	C	137	145	Right-handed alpha
Helix 34	AD7	C	159	164	Right-handed 310
Helix 35	AD8	C	165	168	Right-handed 310
Helix 36	AD9	C	169	182	Right-handed alpha
Helix 37	AE1	C	191	201	Right-handed 310
Helix 38	AE2	C	217	223	Right-handed alpha
Helix 39	AE3	C	223	228	Right-handed alpha
Helix 40	AE4	C	238	246	Right-handed alpha
Helix 41	AE5	C	270	272	Right-handed 310
Helix 42	AE6	C	273	295	Right-handed alpha
Helix 43	AE7	D	25	33	Right-handed alpha
Helix 44	AE8	D	78	92	Right-handed alpha
Helix 45	AE9	D	109	113	Right-handed 310
Helix 46	AF1	D	117	133	Right-handed alpha
Helix 47	AF2	D	137	144	Right-handed alpha
Helix 48	AF3	D	159	164	Right-handed 310
Helix 49	AF4	D	165	168	Right-handed 310
Helix 50	AF5	D	169	182	Right-handed alpha
Helix 51	AF6	D	191	201	Right-handed 310
Helix 52	AF7	D	217	223	Right-handed alpha
Helix 53	AF8	D	223	228	Right-handed alpha
Helix 54	AF9	D	238	245	Right-handed alpha
Helix 55	AG1	D	270	272	Right-handed 310
Helix 56	AG2	D	273	288	Right-handed alpha
Helix 57	AG3	E	25	33	Right-handed alpha
Helix 58	AG4	E	78	92	Right-handed alpha
Helix 59	AG5	E	109	113	Right-handed 310
Helix 60	AG6	E	117	133	Right-handed alpha
Helix 61	AG7	E	137	144	Right-handed alpha
Helix 62	AG8	E	159	164	Right-handed 310
Helix 63	AG9	E	165	168	Right-handed 310
Helix 64	AH1	E	169	182	Right-handed alpha
Helix 65	AH2	E	191	201	Right-handed 310
Helix 66	AH3	E	217	223	Right-handed alpha
Helix 67	AH4	E	223	228	Right-handed alpha
Helix 68	AH5	E	238	246	Right-handed alpha
Helix 69	AH6	E	270	272	Right-handed 310
Helix 70	AH7	E	273	291	Right-handed alpha
Helix 71	AH8	F	25	33	Right-handed alpha
Helix 72	AH9	F	78	92	Right-handed alpha
Helix 73	AI1	F	109	113	Right-handed 310
Helix 74	AI2	F	117	132	Right-handed alpha
Helix 75	AI3	F	137	144	Right-handed alpha
Helix 76	AI4	F	159	164	Right-handed 310
Helix 77	AI5	F	165	168	Right-handed 310
Helix 78	AI6	F	169	182	Right-handed alpha
Helix 79	AI7	F	191	201	Right-handed 310
Helix 80	AI8	F	217	223	Right-handed alpha
Helix 81	AI9	F	223	228	Right-handed alpha
Helix 82	AJ1	F	238	246	Right-handed alpha
Helix 83	AJ2	F	270	272	Right-handed 310
Helix 84	AJ3	F	273	288	Right-handed alpha
Helix 85	AJ4	G	25	33	Right-handed alpha
Helix 86	AJ5	G	78	92	Right-handed alpha
Helix 87	AJ6	G	109	113	Right-handed 310
Helix 88	AJ7	G	117	133	Right-handed alpha
Helix 89	AJ8	G	137	145	Right-handed alpha
Helix 90	AJ9	G	159	164	Right-handed 310
Helix 91	AK1	G	165	168	Right-handed 310
Helix 92	AK2	G	169	182	Right-handed alpha
Helix 93	AK3	G	191	200	Right-handed 310
Helix 94	AK4	G	217	223	Right-handed alpha
Helix 95	AK5	G	223	228	Right-handed alpha
Helix 96	AK6	G	238	246	Right-handed alpha
Helix 97	AK7	G	270	272	Right-handed 310
Helix 98	AK8	G	273	294	Right-handed alpha
Helix 99	AK9	H	25	33	Right-handed alpha
Helix 100	AL1	H	78	92	Right-handed alpha
Helix 101	AL2	H	109	113	Right-handed 310
Helix 102	AL3	H	117	133	Right-handed alpha
Helix 103	AL4	H	137	144	Right-handed alpha
Helix 104	AL5	H	159	164	Right-handed 310
Helix 105	AL6	H	165	168	Right-handed 310
Helix 106	AL7	H	169	182	Right-handed alpha
Helix 107	AL8	H	191	199	Right-handed 310
Helix 108	AL9	H	217	223	Right-handed alpha
Helix 109	AM1	H	223	228	Right-handed alpha
Helix 110	AM2	H	238	246	Right-handed alpha
Helix 111	AM3	H	270	272	Right-handed 310
Helix 112	AM4	H	273	292	Right-handed alpha

There are 24 sheets in PDB entry 5XR3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	13	14	first strand
Strand 2	A	21	23	anti-parallel
Strand 3	A	72	74	parallel
Strand 4	A	64	66	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	135	136	first strand
Strand 2	A	95	100	parallel
Strand 3	A	54	58	parallel
Strand 4	A	151	156	parallel
Strand 5	A	185	189	parallel
Strand 6	A	265	268	parallel
Strand 7	A	259	262	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	212	213	first strand
Strand 2	A	249	250	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	21	22	first strand
Strand 2	B	72	74	parallel
Strand 3	B	64	66	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	135	136	first strand
Strand 2	B	95	100	parallel
Strand 3	B	54	58	parallel
Strand 4	B	151	156	parallel
Strand 5	B	185	189	parallel
Strand 6	B	265	268	parallel
Strand 7	B	259	260	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	212	213	first strand
Strand 2	B	249	250	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	21	22	first strand
Strand 2	C	72	74	parallel
Strand 3	C	64	66	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	135	136	first strand
Strand 2	C	95	100	parallel
Strand 3	C	54	58	parallel
Strand 4	C	151	156	parallel
Strand 5	C	185	188	parallel
Strand 6	C	265	268	parallel
Strand 7	C	259	262	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	212	213	first strand
Strand 2	C	249	250	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	13	14	first strand
Strand 2	D	21	23	anti-parallel
Strand 3	D	72	74	parallel
Strand 4	D	64	66	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	135	136	first strand
Strand 2	D	95	100	parallel
Strand 3	D	54	58	parallel
Strand 4	D	151	156	parallel
Strand 5	D	185	189	parallel
Strand 6	D	265	268	parallel
Strand 7	D	259	262	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	212	213	first strand
Strand 2	D	249	250	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	13	14	first strand
Strand 2	E	21	23	anti-parallel
Strand 3	E	72	74	parallel
Strand 4	E	64	66	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	135	136	first strand
Strand 2	E	95	100	parallel
Strand 3	E	54	58	parallel
Strand 4	E	151	156	parallel
Strand 5	E	185	189	parallel
Strand 6	E	265	268	parallel
Strand 7	E	259	262	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	212	213	first strand
Strand 2	E	249	250	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	13	14	first strand
Strand 2	F	21	23	anti-parallel
Strand 3	F	72	74	parallel
Strand 4	F	64	66	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	135	136	first strand
Strand 2	F	96	100	parallel
Strand 3	F	54	58	parallel
Strand 4	F	151	156	parallel
Strand 5	F	185	189	parallel
Strand 6	F	265	268	parallel
Strand 7	F	259	262	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	212	213	first strand
Strand 2	F	249	250	parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	13	14	first strand
Strand 2	G	21	23	anti-parallel
Strand 3	G	72	74	parallel
Strand 4	G	64	66	anti-parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	135	136	first strand
Strand 2	G	95	100	parallel
Strand 3	G	54	58	parallel
Strand 4	G	151	156	parallel
Strand 5	G	185	189	parallel
Strand 6	G	265	268	parallel
Strand 7	G	259	262	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	212	213	first strand
Strand 2	G	249	250	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	21	22	first strand
Strand 2	H	72	74	parallel
Strand 3	H	64	66	anti-parallel

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There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	135	136	first strand
Strand 2	H	95	100	parallel
Strand 3	H	54	58	parallel
Strand 4	H	151	157	parallel
Strand 5	H	185	189	parallel
Strand 6	H	265	268	parallel
Strand 7	H	259	260	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	212	213	first strand
Strand 2	H	249	250	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5XR3

Analysis of interatomic Contacts of Structural Units in PDB entry:
5XR3