Analysis of interatomic Contacts of Structural Units in PDB entry:
5XR8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XR8 entry

There is 1 chain in PDB entry 5XR8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 102SER 536
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 5XR8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
105 109Right-handed 310
Helix 2
AA2
A
112 146Right-handed alpha
Helix 3
AA3
A
153 179Right-handed alpha
Helix 4
AA4
A
185 220Right-handed alpha
Helix 5
AA5
A
223 228Right-handed alpha
Helix 6
AA6
A
229 254Right-handed alpha
Helix 7
AA7
A
272 306Right-handed alpha
Helix 8
AA8
A
318 335Right-handed alpha
Helix 9
AA9
A
375 382Right-handed alpha
Helix 10
AB1
A
383 386Right-handed 310
Helix 11
AB2
A
407 421Right-handed alpha
Helix 12
AB3
A
438 452Right-handed alpha
Helix 13
AB4
A
460 490Right-handed alpha
Helix 14
AB5
A
494 519Right-handed alpha
Helix 15
AB6
A
523 533Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 5XR8.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
336 342first strand
Strand 2
A
307 313parallel
Strand 3
A
357 361parallel
Strand 4
A
393 399parallel
Strand 5
A
429 432parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il