Analysis of interatomic Contacts of Structural Units in PDB entry:
5XSF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XSF entry

There is 1 chain in PDB entry 5XSF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0ALA 208
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 5XSF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 11Right-handed alpha
Helix 2
AA2
A
21 23Right-handed 310
Helix 3
AA3
A
24 35Right-handed alpha
Helix 4
AA4
A
48 58Right-handed alpha
Helix 5
AA5
A
71 81Right-handed alpha
Helix 6
AA6
A
92 102Right-handed alpha
Helix 7
AA7
A
112 122Right-handed alpha
Helix 8
AA8
A
131 135Right-handed 310
Helix 9
AA9
A
136 148Right-handed alpha
Helix 10
AB1
A
162 169Right-handed alpha
Helix 11
AB2
A
188 201Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5XSF.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 155first strand
Strand 2
A
126 129parallel
Strand 3
A
106 110parallel
Strand 4
A
85 88parallel
Strand 5
A
63 67parallel
Strand 6
A
39 43parallel
Strand 7
A
13 17parallel
Strand 8
A
176 178parallel
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