Analysis of interatomic Contacts of Structural Units in PDB entry:
5XSJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XSJ entry

There are 2 chains in PDB entry 5XSJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 PRO 12VAL 290
L
 SER 134ALA 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 5XSJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
X
26 44Right-handed alpha
Helix 2
AA2
X
56 70Right-handed alpha
Helix 3
AA3
X
85 95Right-handed alpha
Helix 4
AA4
X
118 135Right-handed alpha
Helix 5
AA5
X
149 167Right-handed alpha
Helix 6
AA6
X
180 193Right-handed alpha
Helix 7
AA7
X
207 219Right-handed alpha
Helix 8
AA8
X
233 242Right-handed alpha
Helix 9
AA9
X
252 269Right-handed alpha
Helix 10
AB1
L
135 163Right-handed alpha
Helix 11
AB2
L
164 188Right-handed alpha
Helix 12
AB3
L
192 220Right-handed alpha
Helix 13
AB4
L
223 254Right-handed alpha
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There are 2 sheets in PDB entry 5XSJ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
46 50first strand
Strand 2
X
16 20parallel
Strand 3
X
74 78parallel
Strand 4
X
99 102parallel
Strand 5
X
113 115parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
170 176first strand
Strand 2
X
139 144parallel
Strand 3
X
200 203parallel
Strand 4
X
226 230parallel
Strand 5
X
247 250parallel
Strand 6
X
283 285anti-parallel
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