Analysis of interatomic Contacts of Structural Units in PDB entry:
5XSP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XSP entry

There are 4 chains in PDB entry 5XSP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 318LEU 649
B
 VAL 319LEU 649
C
 A 703 A 704
D
 A 703 A 704
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 5XSP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
318 335Right-handed alpha
Helix 2
AA2
A
347 364Right-handed alpha
Helix 3
AA3
A
373 377Right-handed 310
Helix 4
AA4
A
378 391Right-handed alpha
Helix 5
AA5
A
393 396Right-handed 310
Helix 6
AA6
A
400 408Right-handed alpha
Helix 7
AA7
A
421 425Right-handed 310
Helix 8
AA8
A
427 434Right-handed alpha
Helix 9
AA9
A
464 474Right-handed alpha
Helix 10
AB1
A
483 499Right-handed alpha
Helix 11
AB2
A
506 519Right-handed alpha
Helix 12
AB3
A
522 530Right-handed alpha
Helix 13
AB4
A
533 545Right-handed alpha
Helix 14
AB5
A
566 578Right-handed alpha
Helix 15
AB6
A
608 615Right-handed alpha
Helix 16
AB7
A
633 649Right-handed alpha
Helix 17
AB8
B
320 335Right-handed alpha
Helix 18
AB9
B
347 364Right-handed alpha
Helix 19
AC1
B
373 377Right-handed 310
Helix 20
AC2
B
378 389Right-handed alpha
Helix 21
AC3
B
391 396Right-handed alpha
Helix 22
AC4
B
400 408Right-handed alpha
Helix 23
AC5
B
421 425Right-handed 310
Helix 24
AC6
B
427 434Right-handed alpha
Helix 25
AC7
B
464 474Right-handed alpha
Helix 26
AC8
B
483 499Right-handed alpha
Helix 27
AC9
B
506 519Right-handed alpha
Helix 28
AD1
B
522 530Right-handed alpha
Helix 29
AD2
B
533 545Right-handed alpha
Helix 30
AD3
B
566 578Right-handed alpha
Helix 31
AD4
B
608 615Right-handed alpha
Helix 32
AD5
B
633 649Right-handed alpha
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There are 4 sheets in PDB entry 5XSP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
398 399first strand
Strand 2
A
368 371parallel
Strand 3
A
337 341parallel
Strand 4
A
412 417parallel
Strand 5
A
436 441parallel
Strand 6
A
455 458parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
548 549first strand
Strand 2
A
554 558anti-parallel
Strand 3
A
585 593parallel
Strand 4
A
596 603anti-parallel
Strand 5
A
624 630anti-parallel
Strand 6
A
619 621anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
398 399first strand
Strand 2
B
368 371parallel
Strand 3
B
337 341parallel
Strand 4
B
412 417parallel
Strand 5
B
436 441parallel
Strand 6
B
455 458parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
548 549first strand
Strand 2
B
554 558anti-parallel
Strand 3
B
585 593parallel
Strand 4
B
596 603anti-parallel
Strand 5
B
624 630anti-parallel
Strand 6
B
619 621anti-parallel
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