Analysis of interatomic Contacts of Structural Units in PDB entry:
5XSY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XSY entry

There are 2 chains in PDB entry 5XSY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 110SER 1578
B
 ALA 24ALA 195
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 5XSY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
110 120Right-handed alpha
Helix 2
AA2
A
124 141Right-handed alpha
Helix 3
AA3
A
148 169Right-handed alpha
Helix 4
AA4
A
172 180Right-handed alpha
Helix 5
AA5
A
182 198Right-handed alpha
Helix 6
AA6
A
213 217Right-handed 310
Helix 7
AA7
A
218 224Right-handed alpha
Helix 8
AA8
A
226 264Right-handed alpha
Helix 9
AA9
A
292 297Right-handed alpha
Helix 10
AB1
A
346 360Right-handed alpha
Helix 11
AB2
A
362 374Right-handed alpha
Helix 12
AB3
A
375 379Right-handed 310
Helix 13
AB4
A
380 405Right-handed alpha
Helix 14
AB5
A
405 431Right-handed alpha
Helix 15
AB6
A
549 552Right-handed 310
Helix 16
AB7
A
553 565Right-handed alpha
Helix 17
AB8
A
565 585Right-handed alpha
Helix 18
AB9
A
591 618Right-handed alpha
Helix 19
AC1
A
621 628Right-handed alpha
Helix 20
AC2
A
628 648Right-handed alpha
Helix 21
AC3
A
653 662Right-handed 310
Helix 22
AC4
A
663 668Right-handed alpha
Helix 23
AC5
A
673 684Right-handed alpha
Helix 24
AC6
A
688 717Right-handed alpha
Helix 25
AC7
A
718 721Right-handed 310
Helix 26
AC8
A
734 747Right-handed alpha
Helix 27
AC9
A
750 761Right-handed alpha
Helix 28
AD1
A
762 792Right-handed alpha
Helix 29
AD2
A
984 999Right-handed alpha
Helix 30
AD3
A
999 1018Right-handed alpha
Helix 31
AD4
A
1019 1020Right-handed 310
Helix 32
AD5
A
1021 1026Right-handed 310
Helix 33
AD6
A
1028 1064Right-handed alpha
Helix 34
AD7
A
1066 1082Right-handed alpha
Helix 35
AD8
A
1083 1085Right-handed 310
Helix 36
AD9
A
1097 1102Right-handed alpha
Helix 37
AE1
A
1103 1106Right-handed 310
Helix 38
AE2
A
1107 1112Right-handed alpha
Helix 39
AE3
A
1112 1152Right-handed alpha
Helix 40
AE4
A
1177 1185Right-handed alpha
Helix 41
AE5
A
1200 1209Right-handed alpha
Helix 42
AE6
A
1214 1224Right-handed alpha
Helix 43
AE7
A
1237 1239Right-handed 310
Helix 44
AE8
A
1240 1251Right-handed alpha
Helix 45
AE9
A
1252 1273Right-handed alpha
Helix 46
AF1
A
1283 1298Right-handed alpha
Helix 47
AF2
A
1314 1321Right-handed alpha
Helix 48
AF3
A
1321 1339Right-handed alpha
Helix 49
AF4
A
1340 1342Right-handed 310
Helix 50
AF5
A
1347 1381Right-handed alpha
Helix 51
AF6
A
1383 1406Right-handed alpha
Helix 52
AF7
A
1413 1421Right-handed alpha
Helix 53
AF8
A
1422 1429Right-handed 310
Helix 54
AF9
A
1430 1435Right-handed alpha
Helix 55
AG1
A
1435 1447Right-handed alpha
Helix 56
AG2
A
1449 1474Right-handed alpha
Helix 57
AG3
A
1490 1503Right-handed alpha
Helix 58
AG4
A
1506 1516Right-handed alpha
Helix 59
AG5
A
1539 1570Right-handed alpha
Helix 60
AG6
A
1571 1578Right-handed alpha
Helix 61
AG7
B
115 118Right-handed 310
Helix 62
AG8
B
160 191Right-handed alpha
Helix 63
AG9
B
192 195Right-handed 310
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There are 4 sheets in PDB entry 5XSY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 273first strand
Strand 2
A
328 331anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1157 1160first strand
Strand 2
A
1187 1190anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 35first strand
Strand 2
B
136 150parallel
Strand 3
B
120 131anti-parallel
Strand 4
B
55 65anti-parallel
Strand 5
B
75 77anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 45first strand
Strand 2
B
106 111anti-parallel
Strand 3
B
93 95anti-parallel
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