Analysis of interatomic Contacts of Structural Units in PDB entry:
5XT4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XT4 entry

There is 1 chain in PDB entry 5XT4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 3PHE 677
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 5XT4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 24Right-handed alpha
Helix 2
AA2
A
28 45Right-handed alpha
Helix 3
AA3
A
64 66Right-handed 310
Helix 4
AA4
A
67 78Right-handed alpha
Helix 5
AA5
A
83 89Right-handed alpha
Helix 6
AA6
A
117 138Right-handed alpha
Helix 7
AA7
A
154 160Right-handed alpha
Helix 8
AA8
A
160 173Right-handed alpha
Helix 9
AA9
A
194 196Right-handed 310
Helix 10
AB1
A
200 208Right-handed alpha
Helix 11
AB2
A
221 235Right-handed alpha
Helix 12
AB3
A
257 261Right-handed 310
Helix 13
AB4
A
266 277Right-handed alpha
Helix 14
AB5
A
288 320Right-handed alpha
Helix 15
AB6
A
320 332Right-handed alpha
Helix 16
AB7
A
338 343Right-handed 310
Helix 17
AB8
A
355 367Right-handed alpha
Helix 18
AB9
A
380 385Right-handed alpha
Helix 19
AC1
A
396 400Right-handed 310
Helix 20
AC2
A
414 429Right-handed alpha
Helix 21
AC3
A
440 444Right-handed alpha
Helix 22
AC4
A
446 457Right-handed alpha
Helix 23
AC5
A
468 472Right-handed 310
Helix 24
AC6
A
482 489Right-handed alpha
Helix 25
AC7
A
500 514Right-handed alpha
Helix 26
AC8
A
535 540Right-handed alpha
Helix 27
AC9
A
561 576Right-handed alpha
Helix 28
AD1
A
587 593Right-handed alpha
Helix 29
AD2
A
595 603Right-handed alpha
Helix 30
AD3
A
619 623Right-handed 310
Helix 31
AD4
A
638 646Right-handed alpha
Helix 32
AD5
A
649 664Right-handed alpha
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There are 5 sheets in PDB entry 5XT4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 62first strand
Strand 2
A
149 153parallel
Strand 3
A
178 184parallel
Strand 4
A
240 245parallel
Strand 5
A
211 215parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 188first strand
Strand 2
A
191 192anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 354first strand
Strand 2
A
527 528anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
408 410first strand
Strand 2
A
373 377parallel
Strand 3
A
433 439parallel
Strand 4
A
461 465parallel
Strand 5
A
519 522parallel
Strand 6
A
494 496parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
544 547first strand
Strand 2
A
580 584anti-parallel
Strand 3
A
554 558parallel
Strand 4
A
609 612parallel
Strand 5
A
626 628parallel
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