Analysis of interatomic Contacts of Structural Units in PDB entry:
5XT6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XT6 entry

There are 7 chains in PDB entry 5XT6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 ASN 6LYS 142
A
 HIS 0HIS 360
A
 ALA 362ASN 404
B
 MET 1HIS 360
B
 ALA 362VAL 405
C
 ASN 6THR 40
C
 GLY 42VAL 140
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 5XT6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
6 10Right-handed 310
Helix 2
AA2
D
12 21Right-handed alpha
Helix 3
AA3
D
66 81Right-handed alpha
Helix 4
AA4
D
86 100Right-handed alpha
Helix 5
AA5
D
114 121Right-handed 310
Helix 6
AA6
D
122 124Right-handed 310
Helix 7
AA7
D
125 140Right-handed alpha
Helix 8
AA8
A
2 9Right-handed alpha
Helix 9
AA9
A
10 14Right-handed 310
Helix 10
AB1
A
34 48Right-handed alpha
Helix 11
AB2
A
57 79Right-handed alpha
Helix 12
AB3
A
82 84Right-handed 310
Helix 13
AB4
A
91 103Right-handed alpha
Helix 14
AB5
A
104 107Right-handed 310
Helix 15
AB6
A
121 124Right-handed 310
Helix 16
AB7
A
125 136Right-handed alpha
Helix 17
AB8
A
151 159Right-handed alpha
Helix 18
AB9
A
180 191Right-handed alpha
Helix 19
AC1
A
209 214Right-handed alpha
Helix 20
AC2
A
223 225Right-handed 310
Helix 21
AC3
A
237 243Right-handed alpha
Helix 22
AC4
A
268 272Right-handed 310
Helix 23
AC5
A
277 295Right-handed alpha
Helix 24
AC6
A
295 316Right-handed alpha
Helix 25
AC7
A
340 351Right-handed alpha
Helix 26
AC8
A
362 369Right-handed alpha
Helix 27
AC9
A
384 403Right-handed alpha
Helix 28
AD1
B
2 9Right-handed alpha
Helix 29
AD2
B
10 14Right-handed 310
Helix 30
AD3
B
34 48Right-handed alpha
Helix 31
AD4
B
57 79Right-handed alpha
Helix 32
AD5
B
82 84Right-handed 310
Helix 33
AD6
B
91 103Right-handed alpha
Helix 34
AD7
B
104 107Right-handed 310
Helix 35
AD8
B
121 124Right-handed 310
Helix 36
AD9
B
125 136Right-handed alpha
Helix 37
AE1
B
151 159Right-handed alpha
Helix 38
AE2
B
180 191Right-handed alpha
Helix 39
AE3
B
209 214Right-handed alpha
Helix 40
AE4
B
223 225Right-handed 310
Helix 41
AE5
B
237 243Right-handed alpha
Helix 42
AE6
B
268 272Right-handed 310
Helix 43
AE7
B
277 295Right-handed alpha
Helix 44
AE8
B
295 316Right-handed alpha
Helix 45
AE9
B
340 351Right-handed alpha
Helix 46
AF1
B
362 369Right-handed alpha
Helix 47
AF2
B
384 404Right-handed alpha
Helix 48
AF3
C
6 10Right-handed 310
Helix 49
AF4
C
12 21Right-handed alpha
Helix 50
AF5
C
66 81Right-handed alpha
Helix 51
AF6
C
84 100Right-handed alpha
Helix 52
AF7
C
110 124Right-handed 310
Helix 53
AF8
C
125 140Right-handed alpha
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There are 12 sheets in PDB entry 5XT6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
32 37first strand
Strand 2
D
44 52anti-parallel
Strand 3
D
55 64anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 17first strand
Strand 2
A
20 21anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 24first strand
Strand 2
A
353 354parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 89first strand
Strand 2
A
232 236anti-parallel
Strand 3
A
217 221anti-parallel
Strand 4
A
194 198parallel
Strand 5
A
163 169parallel
Strand 6
A
113 117parallel
Strand 7
A
138 142parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 257first strand
Strand 2
A
262 264anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
320 323first strand
Strand 2
A
331 336anti-parallel
Strand 3
A
374 378anti-parallel
Strand 4
A
356 358anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 17first strand
Strand 2
B
20 21anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 24first strand
Strand 2
B
353 354parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 89first strand
Strand 2
B
232 236anti-parallel
Strand 3
B
217 221anti-parallel
Strand 4
B
194 198parallel
Strand 5
B
163 169parallel
Strand 6
B
113 117parallel
Strand 7
B
138 142parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
254 257first strand
Strand 2
B
262 264anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
320 323first strand
Strand 2
B
331 336anti-parallel
Strand 3
B
375 378anti-parallel
Strand 4
B
356 357anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
32 37first strand
Strand 2
C
44 52anti-parallel
Strand 3
C
55 64anti-parallel
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