Analysis of interatomic Contacts of Structural Units in PDB entry:
5XTF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XTF entry

There are 2 chains in PDB entry 5XTF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3ARG 258
B
 GLY 2ARG 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 5XTF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 27Right-handed alpha
Helix 2
AA2
A
37 49Right-handed alpha
Helix 3
AA3
A
61 77Right-handed alpha
Helix 4
AA4
A
98 114Right-handed alpha
Helix 5
AA5
A
114 132Right-handed alpha
Helix 6
AA6
A
140 144Right-handed 310
Helix 7
AA7
A
150 172Right-handed alpha
Helix 8
AA8
A
223 227Right-handed 310
Helix 9
AA9
A
228 236Right-handed alpha
Helix 10
AB1
B
14 28Right-handed alpha
Helix 11
AB2
B
37 49Right-handed alpha
Helix 12
AB3
B
61 77Right-handed alpha
Helix 13
AB4
B
98 114Right-handed alpha
Helix 14
AB5
B
114 132Right-handed alpha
Helix 15
AB6
B
140 144Right-handed 310
Helix 16
AB7
B
150 172Right-handed alpha
Helix 17
AB8
B
223 227Right-handed 310
Helix 18
AB9
B
228 236Right-handed alpha
Helix 19
AC1
B
253 257Right-handed 310
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There are 2 sheets in PDB entry 5XTF. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 56first strand
Strand 2
A
30 35parallel
Strand 3
A
6 9parallel
Strand 4
A
81 84parallel
Strand 5
A
134 138parallel
Strand 6
A
176 182parallel
Strand 7
A
247 250parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 56first strand
Strand 2
B
30 35parallel
Strand 3
B
6 9parallel
Strand 4
B
81 84parallel
Strand 5
B
134 138parallel
Strand 6
B
176 182parallel
Strand 7
B
247 250parallel
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