Analysis of interatomic Contacts of Structural Units in PDB entry:
5XTZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XTZ entry

There are 6 chains in PDB entry 5XTZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 19THR 157
B
 GLY 18THR 157
C
 VAL 19THR 156
D
 MET 0THR 156
E
 THR 22ARG 26
E
 SER 28ALA 31
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 5XTZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
123 129Right-handed alpha
Helix 2
AA2
A
148 156Right-handed alpha
Helix 3
AA3
B
58 61Right-handed 310
Helix 4
AA4
B
148 156Right-handed alpha
Helix 5
AA5
C
123 129Right-handed alpha
Helix 6
AA6
C
148 155Right-handed alpha
Helix 7
AA7
D
58 61Right-handed 310
Helix 8
AA8
D
123 129Right-handed alpha
Helix 9
AA9
D
148 155Right-handed alpha
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There are 9 sheets in PDB entry 5XTZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 92first strand
Strand 2
A
45 53anti-parallel
Strand 3
A
20 33anti-parallel
Strand 4
A
134 145anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 81first strand
Strand 2
A
63 69anti-parallel
Strand 3
A
95 104anti-parallel
Strand 4
A
112 117anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 81first strand
Strand 2
A
63 69anti-parallel
Strand 3
A
95 104anti-parallel
Strand 4
E
27 28anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 92first strand
Strand 2
B
45 53anti-parallel
Strand 3
B
20 33anti-parallel
Strand 4
B
134 145anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 81first strand
Strand 2
B
63 69anti-parallel
Strand 3
B
97 104anti-parallel
Strand 4
B
112 117anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
86 92first strand
Strand 2
C
45 53anti-parallel
Strand 3
C
20 33anti-parallel
Strand 4
C
134 145anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
78 81first strand
Strand 2
C
63 69anti-parallel
Strand 3
C
97 104anti-parallel
Strand 4
C
112 117anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
86 92first strand
Strand 2
D
45 53anti-parallel
Strand 3
D
20 33anti-parallel
Strand 4
D
134 145anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
78 81first strand
Strand 2
D
63 69anti-parallel
Strand 3
D
97 104anti-parallel
Strand 4
D
112 117anti-parallel
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