Analysis of interatomic Contacts of Structural Units in PDB entry:
5XVH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XVH entry

There is 1 chain in PDB entry 5XVH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -12TYR 283
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 5XVH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-4 0Right-handed 310
Helix 2
AA2
A
11 22Right-handed alpha
Helix 3
AA3
A
32 35Right-handed 310
Helix 4
AA4
A
36 41Right-handed alpha
Helix 5
AA5
A
49 55Right-handed alpha
Helix 6
AA6
A
66 76Right-handed alpha
Helix 7
AA7
A
79 84Right-handed alpha
Helix 8
AA8
A
97 110Right-handed alpha
Helix 9
AA9
A
122 130Right-handed alpha
Helix 10
AB1
A
139 146Right-handed alpha
Helix 11
AB2
A
146 153Right-handed alpha
Helix 12
AB3
A
164 194Right-handed alpha
Helix 13
AB4
A
197 206Right-handed alpha
Helix 14
AB5
A
212 224Right-handed alpha
Helix 15
AB6
A
232 251Right-handed alpha
Helix 16
AB7
A
254 270Right-handed alpha
Helix 17
AB8
A
276 280Right-handed 310
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There are 2 sheets in PDB entry 5XVH. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 46first strand
Strand 2
A
25 29parallel
Strand 3
A
3 6parallel
Strand 4
A
59 62parallel
Strand 5
A
89 92parallel
Strand 6
A
114 117parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 121first strand
Strand 2
A
132 137anti-parallel
Strand 3
A
154 161parallel
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