Analysis of interatomic Contacts of Structural Units in PDB entry:
5XW2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XW2 entry

There is 1 chain in PDB entry 5XW2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 399
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 5XW2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 9Right-handed alpha
Helix 2
AA2
A
14 19Right-handed 310
Helix 3
AA3
A
39 48Right-handed alpha
Helix 4
AA4
A
56 61Right-handed 310
Helix 5
AA5
A
73 77Right-handed 310
Helix 6
AA6
A
80 90Right-handed alpha
Helix 7
AA7
A
91 93Right-handed 310
Helix 8
AA8
A
94 117Right-handed alpha
Helix 9
AA9
A
124 128Right-handed alpha
Helix 10
AB1
A
133 141Right-handed alpha
Helix 11
AB2
A
144 146Right-handed 310
Helix 12
AB3
A
147 162Right-handed alpha
Helix 13
AB4
A
184 200Right-handed alpha
Helix 14
AB5
A
206 214Right-handed alpha
Helix 15
AB6
A
222 238Right-handed alpha
Helix 16
AB7
A
238 255Right-handed alpha
Helix 17
AB8
A
255 265Right-handed alpha
Helix 18
AB9
A
268 280Right-handed alpha
Helix 19
AC1
A
310 315Right-handed alpha
Helix 20
AC2
A
348 367Right-handed alpha
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There are 4 sheets in PDB entry 5XW2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 29first strand
Strand 2
A
34 37anti-parallel
Strand 3
A
306 309parallel
Strand 4
A
286 290anti-parallel
Strand 5
A
53 54anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 123first strand
Strand 2
A
393 395anti-parallel
Strand 3
A
371 372anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
294 296first strand
Strand 2
A
299 301anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
379 380first strand
Strand 2
A
389 391anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il