Analysis of interatomic Contacts of Structural Units in PDB entry:
5XW3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XW3 entry

There are 2 chains in PDB entry 5XW3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 294
B
 MET 1SER 294
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5XW3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 11Right-handed 310
Helix 2
AA2
A
36 38Right-handed 310
Helix 3
AA3
A
43 58Right-handed alpha
Helix 4
AA4
A
77 86Right-handed alpha
Helix 5
AA5
A
99 109Right-handed alpha
Helix 6
AA6
A
120 134Right-handed alpha
Helix 7
AA7
A
143 149Right-handed alpha
Helix 8
AA8
A
151 157Right-handed alpha
Helix 9
AA9
A
157 166Right-handed alpha
Helix 10
AB1
A
182 194Right-handed alpha
Helix 11
AB2
A
243 259Right-handed alpha
Helix 12
AB3
A
263 279Right-handed alpha
Helix 13
AB4
B
6 11Right-handed 310
Helix 14
AB5
B
36 38Right-handed 310
Helix 15
AB6
B
43 58Right-handed alpha
Helix 16
AB7
B
77 86Right-handed alpha
Helix 17
AB8
B
99 109Right-handed alpha
Helix 18
AB9
B
120 134Right-handed alpha
Helix 19
AC1
B
143 149Right-handed alpha
Helix 20
AC2
B
151 157Right-handed alpha
Helix 21
AC3
B
157 166Right-handed alpha
Helix 22
AC4
B
185 194Right-handed alpha
Helix 23
AC5
B
243 259Right-handed alpha
Helix 24
AC6
B
263 279Right-handed alpha
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There are 4 sheets in PDB entry 5XW3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 19first strand
Strand 2
A
29 34anti-parallel
Strand 3
A
285 290parallel
Strand 4
A
172 176parallel
Strand 5
A
198 204parallel
Strand 6
A
238 242parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 116first strand
Strand 2
A
89 95parallel
Strand 3
A
66 69parallel
Strand 4
A
139 140parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 19first strand
Strand 2
B
29 34anti-parallel
Strand 3
B
285 290parallel
Strand 4
B
172 176parallel
Strand 5
B
198 204parallel
Strand 6
B
238 242parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
112 116first strand
Strand 2
B
89 95parallel
Strand 3
B
66 69parallel
Strand 4
B
139 140parallel
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