Analysis of interatomic Contacts of Structural Units in PDB entry:
5XW4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XW4 entry

There are 2 chains in PDB entry 5XW4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE -11GLN 368
B
 GLU -7GLN 368
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 5XW4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
55 72Right-handed alpha
Helix 2
AA2
A
73 76Right-handed 310
Helix 3
AA3
A
87 107Right-handed alpha
Helix 4
AA4
A
109 115Right-handed alpha
Helix 5
AA5
A
116 118Right-handed 310
Helix 6
AA6
A
140 154Right-handed alpha
Helix 7
AA7
A
163 171Right-handed alpha
Helix 8
AA8
A
172 176Right-handed 310
Helix 9
AA9
A
208 221Right-handed alpha
Helix 10
AB1
A
236 241Right-handed alpha
Helix 11
AB2
A
258 275Right-handed alpha
Helix 12
AB3
A
287 303Right-handed alpha
Helix 13
AB4
A
305 317Right-handed alpha
Helix 14
AB5
A
323 342Right-handed alpha
Helix 15
AB6
A
350 354Right-handed 310
Helix 16
AB7
A
362 368Right-handed alpha
Helix 17
AB8
B
55 72Right-handed alpha
Helix 18
AB9
B
73 76Right-handed 310
Helix 19
AC1
B
87 106Right-handed alpha
Helix 20
AC2
B
109 115Right-handed alpha
Helix 21
AC3
B
116 118Right-handed 310
Helix 22
AC4
B
140 154Right-handed alpha
Helix 23
AC5
B
163 171Right-handed alpha
Helix 24
AC6
B
172 176Right-handed 310
Helix 25
AC7
B
208 221Right-handed alpha
Helix 26
AC8
B
236 241Right-handed alpha
Helix 27
AC9
B
258 275Right-handed alpha
Helix 28
AD1
B
287 303Right-handed alpha
Helix 29
AD2
B
305 317Right-handed alpha
Helix 30
AD3
B
323 342Right-handed alpha
Helix 31
AD4
B
350 354Right-handed 310
Helix 32
AD5
B
362 368Right-handed alpha
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There are 6 sheets in PDB entry 5XW4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 14first strand
Strand 2
A
18 22anti-parallel
Strand 3
A
79 84parallel
Strand 4
A
33 36parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 180first strand
Strand 2
A
185 189anti-parallel
Strand 3
A
278 283parallel
Strand 4
A
223 228parallel
Strand 5
A
245 248parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
343 345first strand
Strand 2
A
359 361anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 14first strand
Strand 2
B
18 22anti-parallel
Strand 3
B
79 84parallel
Strand 4
B
33 36parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 180first strand
Strand 2
B
185 189anti-parallel
Strand 3
B
278 283parallel
Strand 4
B
223 228parallel
Strand 5
B
245 248parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
343 345first strand
Strand 2
B
359 361anti-parallel
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